TY - JOUR
T1 - The FANTOM web resource
T2 - From mammalian transcriptional landscape to its dynamic regulation
AU - Kawaji, Hideya
AU - Severin, Jessica
AU - Lizio, Marina
AU - Waterhouse, Andrew
AU - Katayama, Shintaro
AU - Irvine, Katharine M.
AU - Hume, David A.
AU - Forrest, Alistair R.R.
AU - Suzuki, Harukazu
AU - Carninci, Piero
AU - Hayashizaki, Yoshihide
AU - Daub, Carsten O.
PY - 2009/4/19
Y1 - 2009/4/19
N2 - In FANTOM4, an international collaborative research project, we collected a wide range of genome-scale data, including 24 million mRNA 5′-reads (CAGE tags) and microarray expression profiles along a differentiation time course of the human THP-1 cell line and under 52 systematic siRNA perturbations. In addition, data regarding chromatin status derived from ChIP-chip to elucidate the transcriptional regulatory interactions are included. Here we present these data to the research community as an integrated web resource.
AB - In FANTOM4, an international collaborative research project, we collected a wide range of genome-scale data, including 24 million mRNA 5′-reads (CAGE tags) and microarray expression profiles along a differentiation time course of the human THP-1 cell line and under 52 systematic siRNA perturbations. In addition, data regarding chromatin status derived from ChIP-chip to elucidate the transcriptional regulatory interactions are included. Here we present these data to the research community as an integrated web resource.
UR - http://www.scopus.com/inward/record.url?scp=65549128370&partnerID=8YFLogxK
U2 - 10.1186/gb-2009-10-4-r40
DO - 10.1186/gb-2009-10-4-r40
M3 - Article
C2 - 19374775
AN - SCOPUS:65549128370
SN - 1474-7596
VL - 10
JO - Genome Biology
JF - Genome Biology
IS - 4
M1 - R40
ER -