The Evolution of HD2 Proteins in Green Plants

S. Bourque; S. Jeandroz; V. Grandperret; N. Lehotai; S. Aimé; Douglas E. Soltis; N. W. Miles; M. Melkonian; M. K. Deyholos; J. H. Leebens-Mack; M. W. Chase; C. J. Rothfels; D. W. Stevenson; S. W. Graham; X. Wang; S. Wu; J. Chris Pires; Patrick P. Edger; Z. Yan; Y. Xie; E.J. Carpenter; G. K S Wong; D. Wendehenne; V. Nicolas-Francès

doi:10.1016/j.tplants.2016.10.001

The Evolution of HD2 Proteins in Green Plants

S. Bourque, S. Jeandroz, V. Grandperret, N. Lehotai, S. Aimé, Douglas E. Soltis, N. W. Miles, M. Melkonian, M. K. Deyholos, J. H. Leebens-Mack, M. W. Chase, C. J. Rothfels, D. W. Stevenson, S. W. Graham, X. Wang, S. Wu, J. Chris Pires, Patrick P. Edger, Z. Yan, Y. XieE.J. Carpenter, G. K S Wong, D. Wendehenne, V. Nicolas-Francès

Research output: Contribution to journal › Review article › peer-review

39 Citations (Scopus)

Abstract

In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed.

Original language	English
Pages (from-to)	1008-1016
Number of pages	9
Journal	Trends in Plant Science
Volume	21
Issue number	12
DOIs	https://doi.org/10.1016/j.tplants.2016.10.001
Publication status	Published - 1 Dec 2016

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10.1016/j.tplants.2016.10.001

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Bourque, S., Jeandroz, S., Grandperret, V., Lehotai, N., Aimé, S., Soltis, D. E., Miles, N. W., Melkonian, M., Deyholos, M. K., Leebens-Mack, J. H., Chase, M. W., Rothfels, C. J., Stevenson, D. W., Graham, S. W., Wang, X., Wu, S., Pires, J. C., Edger, P. P., Yan, Z., ... Nicolas-Francès, V. (2016). The Evolution of HD2 Proteins in Green Plants. Trends in Plant Science, 21(12), 1008-1016. https://doi.org/10.1016/j.tplants.2016.10.001

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title = "The Evolution of HD2 Proteins in Green Plants",

abstract = "In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed.",

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author = "S. Bourque and S. Jeandroz and V. Grandperret and N. Lehotai and S. Aim{\'e} and Soltis, {Douglas E.} and Miles, {N. W.} and M. Melkonian and Deyholos, {M. K.} and Leebens-Mack, {J. H.} and Chase, {M. W.} and Rothfels, {C. J.} and Stevenson, {D. W.} and Graham, {S. W.} and X. Wang and S. Wu and Pires, {J. Chris} and Edger, {Patrick P.} and Z. Yan and Y. Xie and E.J. Carpenter and Wong, {G. K S} and D. Wendehenne and V. Nicolas-Franc{\`e}s",

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Bourque, S, Jeandroz, S, Grandperret, V, Lehotai, N, Aimé, S, Soltis, DE, Miles, NW, Melkonian, M, Deyholos, MK, Leebens-Mack, JH, Chase, MW, Rothfels, CJ, Stevenson, DW, Graham, SW, Wang, X, Wu, S, Pires, JC, Edger, PP, Yan, Z, Xie, Y, Carpenter, EJ, Wong, GKS, Wendehenne, D & Nicolas-Francès, V 2016, 'The Evolution of HD2 Proteins in Green Plants', Trends in Plant Science, vol. 21, no. 12, pp. 1008-1016. https://doi.org/10.1016/j.tplants.2016.10.001

TY - JOUR

T1 - The Evolution of HD2 Proteins in Green Plants

AU - Bourque, S.

AU - Jeandroz, S.

AU - Grandperret, V.

AU - Lehotai, N.

AU - Aimé, S.

AU - Soltis, Douglas E.

AU - Miles, N. W.

AU - Melkonian, M.

AU - Deyholos, M. K.

AU - Leebens-Mack, J. H.

AU - Chase, M. W.

AU - Rothfels, C. J.

AU - Stevenson, D. W.

AU - Graham, S. W.

AU - Wang, X.

AU - Wu, S.

AU - Pires, J. Chris

AU - Edger, Patrick P.

AU - Yan, Z.

AU - Xie, Y.

AU - Carpenter, E.J.

AU - Wong, G. K S

AU - Wendehenne, D.

AU - Nicolas-Francès, V.

PY - 2016/12/1

Y1 - 2016/12/1

N2 - In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed.

AB - In eukaryotes, protein deacetylation is carried out by two well-conserved histone deacetylase (HDAC) families: RPD3/HDA1 and SIR2. Intriguingly, model plants such as Arabidopsis express an additional plant-specific HDAC family, termed type-2 HDACs (HD2s). Transcriptomic analyses from more than 1300 green plants generated by the 1000 plants (1KP) consortium showed that HD2s appeared early in green plant evolution, the first members being detected in several streptophyte green alga. The HD2 family has expanded via several rounds of successive duplication; members are expressed in all major green plant clades. Interestingly, angiosperm species express new HD2 genes devoid of a zinc-finger domain, one of the main structural features of HD2s. These variants may have been associated with the origin and/or the biology of the ovule/seed.

KW - 1KP project

KW - HD2

KW - type-2 histone deacetylases

KW - zinc finger

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U2 - 10.1016/j.tplants.2016.10.001

DO - 10.1016/j.tplants.2016.10.001

M3 - Review article

C2 - 27789157

SN - 1360-1385

VL - 21

SP - 1008

EP - 1016

JO - Trends in Plant Science

JF - Trends in Plant Science

IS - 12

ER -

The Evolution of HD2 Proteins in Green Plants

Abstract

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