TY - JOUR
T1 - Remnant kenngoor (Phascogale calura) retain genetic connectivity and genetic diversity in a highly fragmented landscape
AU - de Visser, Rhiannon S.J.
AU - Hall, Michelle
AU - Ottewell, Kym
AU - Pierson, Jennifer C.
AU - Sanders, Angela
AU - Friend, J. Anthony
AU - Berry, Laurence
AU - Hogg, Carolyn
AU - Catullo, Renee A.
N1 - Funding Information:
Thank you to Shelley McArthur (DBCA) and Kim Heasman (University of Sydney) for assisting with DNA extractions, Katherine Farquharson (University of Sydney) for assistance with the reference-aligned pipeline, Sean Buckley (DBCA) and Robyn Shaw (DBCA) for statistical advice, and for sharing their knowledge and expertise. This work was supported by resources provided by the Pawsey Supercomputing Research Centre with funding from the Australian Government and the Government of Western Australia.
Funding Information:
Open Access funding enabled and organized by CAUL and its Member Institutions. This project is a collaboration between the University of Western Australia (UWA), the Australian Wildlife Conservancy (AWC), Bush Heritage Australia (BHA), the Western Australian Department of Biodiversity, Conservation and Attractions (DBCA), and the University of Sydney (USYD). Genomic sequencing was funded through the NCRIS funded Bioplatforms Threatened Species Initiative and the generous donations of Peter and Maxine Wilshaw (to BHA), and Prof. Sue Fletcher (to UWA). Laboratory work was provided by DBCA and USYD. Fieldwork for sample collection was funded by BHA, AWC, and DBCA. DBCA’s Kojonup translocation was funded by the Western Australian Government’s State NRM program. AWC sample collection was funded by NSW National Parks and Wildlife Service’s Saving our Species Program.
Publisher Copyright:
© The Author(s) 2024.
PY - 2024/6
Y1 - 2024/6
N2 - Kenngoor (Phascogale calura) persist in < 1% of their original distribution, occupying highly fragmented remnant habitat in south-west Western Australia, with very little known of the genetic diversity of the remaining wild populations. Recently, the species has been translocated to managed reserves to improve its conservation. Understanding genetic structure and patterns of genetic diversity is crucial to inform conservation translocations for species recovery. This study aims to (1) assess genetic structure and genetic diversity across remaining wild locations, (2) assess long-term genetic outcomes of a mixed-source wild-to-wild translocation, and (3) estimate global effective population size. We genotyped 209 samples from 13 locations of fragmented remnant habitat using reduced representation sequencing. An isolation by distance model best explained genetic structure across the survey areas, with evidence of fine scale divergence of two northern locations. Allelic richness and autosomal heterozygosity measures indicated that diversity is spread uniformly across locations, and no locations showed signs of inbreeding or strong genetic drift. The mixed-source translocation has retained the diversity of the wider species ten years post-translocation. Overall, our results suggest that connectivity between survey areas has largely been maintained and that no location has substantially lower genetic diversity, despite the highly fragmented nature of remnant kenngoor habitat. Future translocations should aim to represent a mixture of genetically divergent locations to maintain the diversity present at the species level. Ongoing conservation management will be required to ensure the long-term viability of the species in this fragmented landscape.
AB - Kenngoor (Phascogale calura) persist in < 1% of their original distribution, occupying highly fragmented remnant habitat in south-west Western Australia, with very little known of the genetic diversity of the remaining wild populations. Recently, the species has been translocated to managed reserves to improve its conservation. Understanding genetic structure and patterns of genetic diversity is crucial to inform conservation translocations for species recovery. This study aims to (1) assess genetic structure and genetic diversity across remaining wild locations, (2) assess long-term genetic outcomes of a mixed-source wild-to-wild translocation, and (3) estimate global effective population size. We genotyped 209 samples from 13 locations of fragmented remnant habitat using reduced representation sequencing. An isolation by distance model best explained genetic structure across the survey areas, with evidence of fine scale divergence of two northern locations. Allelic richness and autosomal heterozygosity measures indicated that diversity is spread uniformly across locations, and no locations showed signs of inbreeding or strong genetic drift. The mixed-source translocation has retained the diversity of the wider species ten years post-translocation. Overall, our results suggest that connectivity between survey areas has largely been maintained and that no location has substantially lower genetic diversity, despite the highly fragmented nature of remnant kenngoor habitat. Future translocations should aim to represent a mixture of genetically divergent locations to maintain the diversity present at the species level. Ongoing conservation management will be required to ensure the long-term viability of the species in this fragmented landscape.
KW - Conservation translocation, population genetics, habitat fragmentation
KW - Dasyuridae
KW - Marsupial
UR - http://www.scopus.com/inward/record.url?scp=85184914208&partnerID=8YFLogxK
U2 - 10.1007/s10592-024-01603-z
DO - 10.1007/s10592-024-01603-z
M3 - Article
AN - SCOPUS:85184914208
SN - 1566-0621
VL - 25
SP - 789
EP - 803
JO - Conservation Genetics
JF - Conservation Genetics
IS - 3
ER -