Plant and pathogen genomics: toward building resilience into narrow-leafed lupin through bioinfirmatic approaches

Seyedehmahsa Mousaviderazmahalleh

doi:10.26182/5c1b0e8baf692

Plant and pathogen genomics: toward building resilience into narrow-leafed lupin through bioinfirmatic approaches

Seyedehmahsa Mousaviderazmahalleh

UWA School of Agriculture and Environment

Research output: Thesis › Doctoral Thesis

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Abstract

Narrow-leafed lupin (Lupmus angustitolius), an important crop of agricultural systems, suffers from several limitations including i) its narrow genetic base and ii) its susceptibility to various pathogens, which prevent broader adoption of the crop. This research employed next-generation-sequencing and bioinformatic approaches to identify the useful source of genetic variation in this crop and to develop genomic resources for two of its fungal pathogens. We found that western Mediterranean is the variability hotspot and founder population of narrow-leafed lupin. Hence, the methods applied here prove to have a great potential for crop improvement and to be applied to other crop research.

Original language	English
Qualification	Doctor of Philosophy
Awarding Institution	The University of Western Australia
Supervisors/Advisors	Hane, James, Supervisor Edwards, Dave, Supervisor Erskine, William, Supervisor Nelson, Matthew, Supervisor Bayer, Philipp, Supervisor
Award date	21 Oct 2018
DOIs	https://doi.org/10.26182/5c1b0e8baf692
Publication status	Unpublished - 2018

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10.26182/5c1b0e8baf692

THESIS - DOCTOR OF PHILOSOPHY - MOUSAVIDERAZMAHELLEH Seyedehmahsa - 2018
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Cite this

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AB - Narrow-leafed lupin (Lupmus angustitolius), an important crop of agricultural systems, suffers from several limitations including i) its narrow genetic base and ii) its susceptibility to various pathogens, which prevent broader adoption of the crop. This research employed next-generation-sequencing and bioinformatic approaches to identify the useful source of genetic variation in this crop and to develop genomic resources for two of its fungal pathogens. We found that western Mediterranean is the variability hotspot and founder population of narrow-leafed lupin. Hence, the methods applied here prove to have a great potential for crop improvement and to be applied to other crop research.

KW - Narrow-leafed lupin

KW - domestication

KW - genomics

KW - biodiversity

KW - pathogen

KW - bioinformatics

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DO - 10.26182/5c1b0e8baf692

M3 - Doctoral Thesis

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Plant and pathogen genomics: toward building resilience into narrow-leafed lupin through bioinfirmatic approaches

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