Plant and pathogen genomics: toward building resilience into narrow-leafed lupin through bioinfirmatic approaches

Seyedehmahsa Mousaviderazmahalleh

Research output: ThesisDoctoral Thesis

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Abstract

Narrow-leafed lupin (Lupmus angustitolius), an important crop of agricultural systems, suffers from several limitations including i) its narrow genetic base and ii) its susceptibility to various pathogens, which prevent broader adoption of the crop. This research employed next-generation-sequencing and bioinformatic approaches to identify the useful source of genetic variation in this crop and to develop genomic resources for two of its fungal pathogens. We found that western Mediterranean is the variability hotspot and founder population of narrow-leafed lupin. Hence, the methods applied here prove to have a great potential for crop improvement and to be applied to other crop research.
Original languageEnglish
QualificationDoctor of Philosophy
Awarding Institution
  • The University of Western Australia
Award date21 Oct 2018
DOIs
Publication statusUnpublished - 2018

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Lupinus
genomics
pathogens
crops
founder effect
bioinformatics
genetic background
genetic variation

Cite this

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Plant and pathogen genomics: toward building resilience into narrow-leafed lupin through bioinfirmatic approaches. / Mousaviderazmahalleh, Seyedehmahsa.

2018.

Research output: ThesisDoctoral Thesis

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AU - Mousaviderazmahalleh, Seyedehmahsa

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Y1 - 2018

N2 - Narrow-leafed lupin (Lupmus angustitolius), an important crop of agricultural systems, suffers from several limitations including i) its narrow genetic base and ii) its susceptibility to various pathogens, which prevent broader adoption of the crop. This research employed next-generation-sequencing and bioinformatic approaches to identify the useful source of genetic variation in this crop and to develop genomic resources for two of its fungal pathogens. We found that western Mediterranean is the variability hotspot and founder population of narrow-leafed lupin. Hence, the methods applied here prove to have a great potential for crop improvement and to be applied to other crop research.

AB - Narrow-leafed lupin (Lupmus angustitolius), an important crop of agricultural systems, suffers from several limitations including i) its narrow genetic base and ii) its susceptibility to various pathogens, which prevent broader adoption of the crop. This research employed next-generation-sequencing and bioinformatic approaches to identify the useful source of genetic variation in this crop and to develop genomic resources for two of its fungal pathogens. We found that western Mediterranean is the variability hotspot and founder population of narrow-leafed lupin. Hence, the methods applied here prove to have a great potential for crop improvement and to be applied to other crop research.

KW - Narrow-leafed lupin

KW - domestication

KW - genomics

KW - biodiversity

KW - pathogen

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DO - 10.26182/5c1b0e8baf692

M3 - Doctoral Thesis

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