Method for Characterization of Root Traits in Chickpea Germplasm for Legume Genomics and Breeding

Research output: Chapter in Book/Conference paperChapter

Abstract

A semi-hydroponic phenotyping platform was constructed using inexpensive and easily obtained materials for characterizing root trait variability in a large set of chickpea (Cicer arietinum) germplasm. The system was designed to accommodate a large number of plants in a small area allowing relatively deeper root development, and thus serves as a high-throughput phenotyping tool for studying root dynamic growth. The root trait quantitative platform could provide accurate phenotyping data for parameterizing root models and for genome-wide association analyses or mapping studies of quantitative trait loci.

Original languageEnglish
Title of host publicationLegume Genomics
Subtitle of host publicationMethods and Protocols
EditorsMukesh Jain, Rohini Garg
Place of PublicationNew York
PublisherHumana Press
Pages269-275
Number of pages7
Volume2107
ISBN (Electronic)978-1-0716-0235-5
ISBN (Print)978-1-0716-0234-8
DOIs
Publication statusPublished - 1 Jan 2020

Publication series

NameMethods in molecular biology (Clifton, N.J.)
PublisherHumana Press
ISSN (Print)1064-3745

Fingerprint

Cicer
Genomics
Fabaceae
Breeding
Hydroponics
Quantitative Trait Loci
Genome-Wide Association Study
Growth

Cite this

Chen, Y., Zhou, T., & Siddique, K. (2020). Method for Characterization of Root Traits in Chickpea Germplasm for Legume Genomics and Breeding. In M. Jain, & R. Garg (Eds.), Legume Genomics: Methods and Protocols (Vol. 2107, pp. 269-275). (Methods in molecular biology (Clifton, N.J.)). New York: Humana Press. https://doi.org/10.1007/978-1-0716-0235-5_14
Chen, Yinglong ; Zhou, Tao ; Siddique, Kadambot. / Method for Characterization of Root Traits in Chickpea Germplasm for Legume Genomics and Breeding. Legume Genomics: Methods and Protocols. editor / Mukesh Jain ; Rohini Garg. Vol. 2107 New York : Humana Press, 2020. pp. 269-275 (Methods in molecular biology (Clifton, N.J.)).
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Chen, Y, Zhou, T & Siddique, K 2020, Method for Characterization of Root Traits in Chickpea Germplasm for Legume Genomics and Breeding. in M Jain & R Garg (eds), Legume Genomics: Methods and Protocols. vol. 2107, Methods in molecular biology (Clifton, N.J.), Humana Press, New York, pp. 269-275. https://doi.org/10.1007/978-1-0716-0235-5_14

Method for Characterization of Root Traits in Chickpea Germplasm for Legume Genomics and Breeding. / Chen, Yinglong; Zhou, Tao; Siddique, Kadambot.

Legume Genomics: Methods and Protocols. ed. / Mukesh Jain; Rohini Garg. Vol. 2107 New York : Humana Press, 2020. p. 269-275 (Methods in molecular biology (Clifton, N.J.)).

Research output: Chapter in Book/Conference paperChapter

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N2 - A semi-hydroponic phenotyping platform was constructed using inexpensive and easily obtained materials for characterizing root trait variability in a large set of chickpea (Cicer arietinum) germplasm. The system was designed to accommodate a large number of plants in a small area allowing relatively deeper root development, and thus serves as a high-throughput phenotyping tool for studying root dynamic growth. The root trait quantitative platform could provide accurate phenotyping data for parameterizing root models and for genome-wide association analyses or mapping studies of quantitative trait loci.

AB - A semi-hydroponic phenotyping platform was constructed using inexpensive and easily obtained materials for characterizing root trait variability in a large set of chickpea (Cicer arietinum) germplasm. The system was designed to accommodate a large number of plants in a small area allowing relatively deeper root development, and thus serves as a high-throughput phenotyping tool for studying root dynamic growth. The root trait quantitative platform could provide accurate phenotyping data for parameterizing root models and for genome-wide association analyses or mapping studies of quantitative trait loci.

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DO - 10.1007/978-1-0716-0235-5_14

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SN - 978-1-0716-0234-8

VL - 2107

T3 - Methods in molecular biology (Clifton, N.J.)

SP - 269

EP - 275

BT - Legume Genomics

A2 - Jain, Mukesh

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Chen Y, Zhou T, Siddique K. Method for Characterization of Root Traits in Chickpea Germplasm for Legume Genomics and Breeding. In Jain M, Garg R, editors, Legume Genomics: Methods and Protocols. Vol. 2107. New York: Humana Press. 2020. p. 269-275. (Methods in molecular biology (Clifton, N.J.)). https://doi.org/10.1007/978-1-0716-0235-5_14