Isolated Random Forest Assisted Spatio-Temporal Ant Colony Evolutionary Algorithm for Cell Tracking in Time-Lapse Sequences

Benlian Xu, Di Wu, Jian Shi, Jinliang Cong, Mingli Lu, Feng Yang, Brett Nener

Research output: Contribution to journalArticlepeer-review

Abstract

Multi-Object tracking in real world environments is a tough problem, especially for cell morphogenesis with division. Most cell tracking methods are hard to achieve reliable mitosis detection, efficient inter-frame matching, and accurate state estimation simultaneously within a unified tracking framework. In this paper, we propose a novel unified framework that leverages a spatio-temporal ant colony evolutionary algorithm to track cells amidst mitosis under measurement uncertainty. Each Bernoulli ant colony representing a migrating cell is able to capture the occurrence of mitosis through the proposed Isolation Random Forest (IRF)-assisted temporal mitosis detection algorithm with the assumption that mitotic cells exhibit unique spatio-temporal features different from non-mitotic ones. Guided by prediction of a division event, multiple ant colonies evolve between consecutive frames according to an augmented assignment matrix solved by the extended Hungarian method. To handle dense cell populations, an efficient group partition between cells and measurements is exploited, which enables multiple assignment tasks to be executed in parallel with a reduction in matrix dimension. After inter-frame traversing, the ant colony transitions to a foraging stage in which it begins approximating the Bernoulli parameter to estimate cell state by iteratively updating its pheromone field. Experiments on multi-cell tracking in the presence of cell mitosis and morphological changes are conducted, and the results demonstrate that the proposed method outperforms state-of-the-art approaches, striking a balance between accuracy and computational efficiency.

Original languageEnglish
Pages (from-to)4157-4169
Number of pages13
JournalIEEE Journal of Biomedical and Health Informatics
Volume28
Issue number7
Early online date25 Apr 2024
DOIs
Publication statusPublished - 2024

Fingerprint

Dive into the research topics of 'Isolated Random Forest Assisted Spatio-Temporal Ant Colony Evolutionary Algorithm for Cell Tracking in Time-Lapse Sequences'. Together they form a unique fingerprint.

Cite this