@article{9f2e5ee69ddc4b589f943475d133f1ce,
title = "Improved Criteria for the Classification of Titin Variants in Inherited Skeletal Myopathies",
abstract = "BACKGROUND: Extensive genetic screening results in the identification of thousands of rare variants that are difficult to interpret. Because of its sheer size, rare variants in the titin gene (TTN) are detected frequently in any individual. Unambiguous interpretation of molecular findings is almost impossible in many patients with myopathies or cardiomyopathies. OBJECTIVE: To refine the current classification framework for TTN-associated skeletal muscle disorders and standardize the interpretation of TTN variants. METHODS: We used the guidelines issued by the American College of Medical Genetics and Genomics (ACMG) and the Association for Molecular Pathology (AMP) to re-analyze TTN genetic findings from our patient cohort. RESULTS: We identified in the classification guidelines three rules that are not applicable to titin-related skeletal muscle disorders; six rules that require disease-/gene-specific adjustments and four rules requiring quantitative thresholds for a proper use. In three cases, the rule strength need to be modified. CONCLUSIONS: We suggest adjustments are made to the guidelines. We provide frequency thresholds to facilitate filtering of candidate causative variants and guidance for the use and interpretation of functional data and co-segregation evidence. We expect that the variant classification framework for TTN-related skeletal muscle disorders will be further improved along with a better understanding of these diseases.",
keywords = "Cardiomyopathies/classification, Connectin/genetics, Humans, Muscular Diseases/classification, Practice Guidelines as Topic/standards",
author = "Marco Savarese and Mridul Johari and Katherine Johnson and Meharji Arumilli and Annalaura Torella and Ana T{\"o}pf and Anna Rubegni and Marius Kuhn and Teresa Giugliano and Dieter Gl{\"a}ser and Fabiana Fattori and Rachel Thompson and Sini Penttil{\"a} and Sara Lehtinen and Sara Gibertini and Alessandra Ruggieri and Marina Mora and Ales Maver and Borut Peterlin and Ami Mankodi and Hanns Lochm{\"u}ller and Santorelli, {Filippo Maria} and Benedikt Schoser and Lenka Fajkusov{\'a} and Volker Straub and Vincenzo Nigro and Peter Hackman and Bjarne Udd",
note = "Funding Information: This study was supported by Association Fran-caise contre les Myopathies (M.S.), Orion foundation (M.S.), Magnus Ehrnrooth Foundation (M.S.), P{\"a}ivikki ja Sakari Sohlbergin S{\"a}{\"a}ti{\"o} (M.S.), Jane and Aatos Erkko Foundation (P.H.), Medicinska Underst{\"o}dsf{\"o}reningen Liv och H{\"a}lsa rf (P.H.), Folkh{\"a}lsan Research Foundation (B.U.), Erkko Foundation (B.U.), Juselius Foundation (B.U.), Finnish Academy (B.U.), Telethon Italy (V.N.) and Telethon-UILDM (Unione Italiana Lotta alla Dis-trofia Muscolare) (V.N.). The MYO-SEQ project was supported by Sanofi Genzyme, Ultragenyx, LGMD2I Research Fund, Samantha J Brazzo Foundation, LGMD2D Foundation, Kurt+Peter Foundation, Muscular Dystrophy UK and Coalition to Cure Calpain 3. The HTS work in inherited myopathies in Pisa Lab is supported by Regione Toscana FAS SALUTE 2014 (CUP 4042.16092014.066000060 to FMS). H.L. and R.T. are supported by the European Union Seventh Framework Programme (FP7/2007-2013) under grant agreement Nos. 305444 (RD-Connect). AM is supported by Intramural Research Program at National Institute of Neurological Disorders and Stroke. Funding Information: This study was supported by Association Francaise contre les Myopathies (M.S.), Orion foundation (M.S.), Magnus Ehrnrooth Foundation (M.S.), P?ivikki ja Sakari Sohlbergin S??ti? (M.S.), Jane and Aatos Erkko Foundation (P.H.), Medicinska Underst?dsf?reningen Liv och H?lsa rf (P.H.), Folkh?lsan Research Foundation (B.U.), Erkko Foundation (B.U.), Juselius Foundation (B.U.), Finnish Academy (B.U.), Telethon Italy (V.N.) and Telethon-UILDM (Unione Italiana Lotta alla Distrofia Muscolare) (V.N.). The MYO-SEQ project was supported by Sanofi Genzyme, Ultragenyx, LGMD2I Research Fund, Samantha J Brazzo Foundation, LGMD2D Foundation, Kurt+Peter Foundation, Muscular Dystrophy UK and Coalition to Cure Calpain 3. The HTS work in inherited myopathies in Pisa Lab is supported by Regione Toscana FAS SALUTE 2014 (CUP 4042.16092014.066000060 to FMS). H.L. and R.T. are supported by the European Union Seventh Framework Programme (FP7/2007-2013) under grant agreement Nos. 305444 (RD-Connect). AM is supported by Intramural Research Program at National Institute of Neurological Disorders and Stroke. Publisher Copyright: {\textcopyright} 2020 - IOS Press and the authors. All rights reserved.",
year = "2020",
doi = "10.3233/JND-190423",
language = "English",
volume = "7",
pages = "153--166",
journal = "Journal of Neuromuscular Diseases",
issn = "2214-3599",
publisher = "IOS Press",
number = "2",
}