Projects per year
Abstract
© 2016
Understanding the link between how proteins function in animals that live in extreme environments and selection on specific properties of amino acids has proved extremely challenging. Here we present the discovery of how the compressibility of opsin proteins in two evolutionarily distinct animal groups, teleosts and cephalopods, appears to be adapted to the high-pressure environment of the deep-sea. We report how in both groups, opsins in deeper living species are calculated to be less compressible. This is largely due to a common set of amino acid sites (bovRH# 159, 196, 213, 275) undergoing positive destabilizing selection in six of the twelve amino acid physiochemical properties that determine protein compressibility. This suggests a common evolutionary mechanism to reduce the adiabatic compressibility of opsin proteins. Intriguingly, the sites under selection are on the proteins’ outer faces at locations known to be involved in opsin-opsin dimer interactions.
Understanding the link between how proteins function in animals that live in extreme environments and selection on specific properties of amino acids has proved extremely challenging. Here we present the discovery of how the compressibility of opsin proteins in two evolutionarily distinct animal groups, teleosts and cephalopods, appears to be adapted to the high-pressure environment of the deep-sea. We report how in both groups, opsins in deeper living species are calculated to be less compressible. This is largely due to a common set of amino acid sites (bovRH# 159, 196, 213, 275) undergoing positive destabilizing selection in six of the twelve amino acid physiochemical properties that determine protein compressibility. This suggests a common evolutionary mechanism to reduce the adiabatic compressibility of opsin proteins. Intriguingly, the sites under selection are on the proteins’ outer faces at locations known to be involved in opsin-opsin dimer interactions.
Original language | English |
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Pages (from-to) | 160-165 |
Number of pages | 6 |
Journal | Molecular Phylogenetics and Evolution |
Volume | 105 |
Early online date | 12 Aug 2016 |
DOIs | |
Publication status | Published - 1 Dec 2016 |
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Dive into the research topics of 'Evolution under pressure and the adaptation of visual pigment compressibility in deep-sea environments'. Together they form a unique fingerprint.Projects
- 2 Finished
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RoboCrab: An integrative approach to the natural ecology of decision making
Hemmi, J., Partridge, J. & Webb, B.
ARC Australian Research Council
1/01/16 → 31/12/19
Project: Research
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Transcriptome sequencing and functional characterisation of craniate non-visual sensory systems and their adaptation to diverse light environments
Davies, W., Hunt, D., Carter, K., Hemmi, J. & Partridge, J.
ARC Australian Research Council
1/01/14 → 30/06/17
Project: Research