Breakpoint junction features of seven DMD deletion mutations

Niall P. Keegan, Steve D. Wilton, Sue Fletcher

Research output: Contribution to journalArticle

Abstract

Duchenne muscular dystrophy is an inherited muscle wasting disease with severe symptoms and onset in early childhood. Duchenne muscular dystrophy is caused by loss-of-function mutations, most commonly deletions, within the DMD gene. Characterizing the junction points of large genomic deletions facilitates a more detailed model of the origins of these mutations and allows for a greater understanding of phenotypic variations associated with particular genotypes, potentially providing insights into the deletion mechanism. Here, we report sequencing of breakpoint junctions for seven patients with intragenic, whole-exon DMD deletions. Of the seven junction sequences identified, we found one instance of a “clean” break, three instances of microhomology (2–5 bp) at the junction site, and three complex rearrangements involving local sequences. Bioinformatics analysis of the upstream and downstream breakpoint regions revealed a possible role of short inverted repeats in the initiation of some of these deletion events.

Original languageEnglish
Article number39
JournalHuman Genome Variation
Volume6
Issue number1
DOIs
Publication statusPublished - 1 Dec 2019

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Duchenne Muscular Dystrophy
Sequence Deletion
Bioinformatics
Muscle
Exons
Genes
Wasting Syndrome
Mutation
Computational Biology
Genotype
Muscles

Cite this

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Breakpoint junction features of seven DMD deletion mutations. / Keegan, Niall P.; Wilton, Steve D.; Fletcher, Sue.

In: Human Genome Variation, Vol. 6, No. 1, 39, 01.12.2019.

Research output: Contribution to journalArticle

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