Analysis of an RNA-seq strand-specific library from an East Timorese cucumber sample reveals a complete Cucurbit aphid-borne yellows virus genome

Solomon Maina, Owain R. Edwards, Luis Almeida, Abel Ximenes, Roger A. C. Jones

Research output: Contribution to journalArticle

10 Citations (Scopus)

Abstract

Analysis of an RNA-seq library from cucumber leaf RNA extracted from a fast technology for analysis of nucleic acids (FTA) card revealed the first complete genome of Cucurbit aphid-borne yellows virus (CABYV) from East Timor. We compare it with 35 complete CABYV genomes from other world regions. It most resembled
the genome of the South Korean isolate HD118.
Original languageEnglish
Article numbere00320-17
Number of pages2
JournalGenome Announcements
Volume5
Issue number19
DOIs
Publication statusPublished - May 2017

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Cucumis sativus
Aphids
Libraries
Genome
RNA
Viruses
Nucleic Acids
Technology

Cite this

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Analysis of an RNA-seq strand-specific library from an East Timorese cucumber sample reveals a complete Cucurbit aphid-borne yellows virus genome. / Maina, Solomon; Edwards, Owain R.; Almeida, Luis ; Ximenes, Abel; Jones, Roger A. C.

In: Genome Announcements, Vol. 5, No. 19, e00320-17, 05.2017.

Research output: Contribution to journalArticle

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AU - Ximenes, Abel

AU - Jones, Roger A. C.

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AB - Analysis of an RNA-seq library from cucumber leaf RNA extracted from a fast technology for analysis of nucleic acids (FTA) card revealed the first complete genome of Cucurbit aphid-borne yellows virus (CABYV) from East Timor. We compare it with 35 complete CABYV genomes from other world regions. It most resembledthe genome of the South Korean isolate HD118.

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