Analysis of an RNA-seq strand-specific library from an East Timorese cucumber sample reveals a complete Cucurbit aphid-borne yellows virus genome

Solomon Maina; Owain R. Edwards; Luis  Almeida; Abel Ximenes; Roger A. C. Jones

doi:10.1128/genomeA.00320-17

Analysis of an RNA-seq strand-specific library from an East Timorese cucumber sample reveals a complete Cucurbit aphid-borne yellows virus genome

Solomon Maina, Owain R. Edwards, Luis Almeida, Abel Ximenes, Roger A. C. Jones

Research output: Contribution to journal › Article

11 Citations (Scopus)

Abstract

Analysis of an RNA-seq library from cucumber leaf RNA extracted from a fast technology for analysis of nucleic acids (FTA) card revealed the first complete genome of Cucurbit aphid-borne yellows virus (CABYV) from East Timor. We compare it with 35 complete CABYV genomes from other world regions. It most resembled
the genome of the South Korean isolate HD118.

Original language	English
Article number	e00320-17
Number of pages	2
Journal	Genome Announcements
Volume	5
Issue number	19
DOIs	https://doi.org/10.1128/genomeA.00320-17
Publication status	Published - May 2017

Access to Document

10.1128/genomeA.00320-17

http://www.ncbi.nlm.nih.gov/pubmed/28495776

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abstract = "Analysis of an RNA-seq library from cucumber leaf RNA extracted from a fast technology for analysis of nucleic acids (FTA) card revealed the first complete genome of Cucurbit aphid-borne yellows virus (CABYV) from East Timor. We compare it with 35 complete CABYV genomes from other world regions. It most resembledthe genome of the South Korean isolate HD118.",

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