An early warning system for emerging SARS-CoV-2 variants

Lorenzo Subissi; Anne von Gottberg; Lipi Thukral; Nathalie Worp; Bas B. Oude Munnink; Surabhi Rathore; Laith J. Abu-Raddad; Ximena Aguilera; Erik Alm; Brett N. Archer; Homa Attar Cohen; Amal Barakat; Wendy S. Barclay; Jinal N. Bhiman; Leon Caly; Meera Chand; Mark Chen; Ann Cullinane; Tulio de Oliveira; Christian Drosten; Julian Druce; Paul Effler; Ihab El Masry; Adama Faye; Simani Gaseitsiwe; Elodie Ghedin; Rebecca Grant; Bart L. Haagmans; Belinda L. Herring; Shilpa S. Iyer; Zyleen Kassamali; Manish Kakkar; Rebecca J. Kondor; Juliana A. Leite; Yee Sin Leo; Gabriel M. Leung; Marco Marklewitz; Sikhulile Moyo; Jairo Mendez-Rico; Nada M. Melhem; Vincent Munster; Karen Nahapetyan; Djin Ye Oh; Boris I. Pavlin; Thomas P. Peacock; Malik Peiris; Zhibin Peng; Leo L.M. Poon; Andrew Rambaut; Jilian Sacks; Yinzhong Shen; Marilda M. Siqueira; Sofonias K. Tessema; Erik M. Volz; Volker Thiel; Sylvie van der Werf; Sylvie Briand; Mark D. Perkins; Maria D. Van Kerkhove; Marion P.G. Koopmans; Anurag Agrawal

doi:10.1038/s41591-022-01836-w

An early warning system for emerging SARS-CoV-2 variants

Lorenzo Subissi, Anne von Gottberg, Lipi Thukral, Nathalie Worp, Bas B. Oude Munnink, Surabhi Rathore, Laith J. Abu-Raddad, Ximena Aguilera, Erik Alm, Brett N. Archer, Homa Attar Cohen, Amal Barakat, Wendy S. Barclay, Jinal N. Bhiman, Leon Caly, Meera Chand, Mark Chen, Ann Cullinane, Tulio de Oliveira, Christian DrostenJulian Druce, Paul Effler, Ihab El Masry, Adama Faye, Simani Gaseitsiwe, Elodie Ghedin, Rebecca Grant, Bart L. Haagmans, Belinda L. Herring, Shilpa S. Iyer, Zyleen Kassamali, Manish Kakkar, Rebecca J. Kondor, Juliana A. Leite, Yee Sin Leo, Gabriel M. Leung, Marco Marklewitz, Sikhulile Moyo, Jairo Mendez-Rico, Nada M. Melhem, Vincent Munster, Karen Nahapetyan, Djin Ye Oh, Boris I. Pavlin, Thomas P. Peacock, Malik Peiris, Zhibin Peng, Leo L.M. Poon, Andrew Rambaut, Jilian Sacks, Yinzhong Shen, Marilda M. Siqueira, Sofonias K. Tessema, Erik M. Volz, Volker Thiel, Sylvie van der Werf, Sylvie Briand, Mark D. Perkins, Maria D. Van Kerkhove, Marion P.G. Koopmans, Anurag Agrawal

Pathology & Laboratory Medicine

Research output: Contribution to journal › Comment/debate › peer-review

45 Citations (Scopus)

Abstract

Global sequencing and surveillance capacity for SARS-CoV-2 must be strengthened and combined with multidisciplinary studies of infectivity, virulence and immune escape, in order to track the unpredictable evolution of the ongoing COVID-19 pandemic

Original language	English
Pages (from-to)	1110-1115
Number of pages	6
Journal	Nature Medicine
Volume	28
Issue number	6
DOIs	https://doi.org/10.1038/s41591-022-01836-w
Publication status	Published - Jun 2022

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Subissi, L., von Gottberg, A., Thukral, L., Worp, N., Oude Munnink, B. B., Rathore, S., Abu-Raddad, L. J., Aguilera, X., Alm, E., Archer, B. N., Attar Cohen, H., Barakat, A., Barclay, W. S., Bhiman, J. N., Caly, L., Chand, M., Chen, M., Cullinane, A., de Oliveira, T., ... Agrawal, A. (2022). An early warning system for emerging SARS-CoV-2 variants. Nature Medicine, 28(6), 1110-1115. https://doi.org/10.1038/s41591-022-01836-w

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title = "An early warning system for emerging SARS-CoV-2 variants",

abstract = "Global sequencing and surveillance capacity for SARS-CoV-2 must be strengthened and combined with multidisciplinary studies of infectivity, virulence and immune escape, in order to track the unpredictable evolution of the ongoing COVID-19 pandemic",

author = "Lorenzo Subissi and {von Gottberg}, Anne and Lipi Thukral and Nathalie Worp and {Oude Munnink}, {Bas B.} and Surabhi Rathore and Abu-Raddad, {Laith J.} and Ximena Aguilera and Erik Alm and Archer, {Brett N.} and {Attar Cohen}, Homa and Amal Barakat and Barclay, {Wendy S.} and Bhiman, {Jinal N.} and Leon Caly and Meera Chand and Mark Chen and Ann Cullinane and {de Oliveira}, Tulio and Christian Drosten and Julian Druce and Paul Effler and {El Masry}, Ihab and Adama Faye and Simani Gaseitsiwe and Elodie Ghedin and Rebecca Grant and Haagmans, {Bart L.} and Herring, {Belinda L.} and Iyer, {Shilpa S.} and Zyleen Kassamali and Manish Kakkar and Kondor, {Rebecca J.} and Leite, {Juliana A.} and Leo, {Yee Sin} and Leung, {Gabriel M.} and Marco Marklewitz and Sikhulile Moyo and Jairo Mendez-Rico and Melhem, {Nada M.} and Vincent Munster and Karen Nahapetyan and Oh, {Djin Ye} and Pavlin, {Boris I.} and Peacock, {Thomas P.} and Malik Peiris and Zhibin Peng and Poon, {Leo L.M.} and Andrew Rambaut and Jilian Sacks and Yinzhong Shen and Siqueira, {Marilda M.} and Tessema, {Sofonias K.} and Volz, {Erik M.} and Volker Thiel and {van der Werf}, Sylvie and Sylvie Briand and Perkins, {Mark D.} and {Van Kerkhove}, {Maria D.} and Koopmans, {Marion P.G.} and Anurag Agrawal",

note = "Funding Information: We acknowledge scientists, public health professionals and Ministries of Health across the world for early generation and sharing of data on SARS-CoV-2 variants.",

year = "2022",

month = jun,

doi = "10.1038/s41591-022-01836-w",

language = "English",

volume = "28",

pages = "1110--1115",

journal = "Nature Medicine",

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Subissi, L, von Gottberg, A, Thukral, L, Worp, N, Oude Munnink, BB, Rathore, S, Abu-Raddad, LJ, Aguilera, X, Alm, E, Archer, BN, Attar Cohen, H, Barakat, A, Barclay, WS, Bhiman, JN, Caly, L, Chand, M, Chen, M, Cullinane, A, de Oliveira, T, Drosten, C, Druce, J, Effler, P, El Masry, I, Faye, A, Gaseitsiwe, S, Ghedin, E, Grant, R, Haagmans, BL, Herring, BL, Iyer, SS, Kassamali, Z, Kakkar, M, Kondor, RJ, Leite, JA, Leo, YS, Leung, GM, Marklewitz, M, Moyo, S, Mendez-Rico, J, Melhem, NM, Munster, V, Nahapetyan, K, Oh, DY, Pavlin, BI, Peacock, TP, Peiris, M, Peng, Z, Poon, LLM, Rambaut, A, Sacks, J, Shen, Y, Siqueira, MM, Tessema, SK, Volz, EM, Thiel, V, van der Werf, S, Briand, S, Perkins, MD, Van Kerkhove, MD, Koopmans, MPG & Agrawal, A 2022, 'An early warning system for emerging SARS-CoV-2 variants', Nature Medicine, vol. 28, no. 6, pp. 1110-1115. https://doi.org/10.1038/s41591-022-01836-w

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AU - Subissi, Lorenzo

AU - von Gottberg, Anne

AU - Thukral, Lipi

AU - Worp, Nathalie

AU - Oude Munnink, Bas B.

AU - Rathore, Surabhi

AU - Abu-Raddad, Laith J.

AU - Aguilera, Ximena

AU - Alm, Erik

AU - Archer, Brett N.

AU - Attar Cohen, Homa

AU - Barakat, Amal

AU - Barclay, Wendy S.

AU - Bhiman, Jinal N.

AU - Caly, Leon

AU - Chand, Meera

AU - Chen, Mark

AU - Cullinane, Ann

AU - de Oliveira, Tulio

AU - Drosten, Christian

AU - Druce, Julian

AU - Effler, Paul

AU - El Masry, Ihab

AU - Faye, Adama

AU - Gaseitsiwe, Simani

AU - Ghedin, Elodie

AU - Grant, Rebecca

AU - Haagmans, Bart L.

AU - Herring, Belinda L.

AU - Iyer, Shilpa S.

AU - Kassamali, Zyleen

AU - Kakkar, Manish

AU - Kondor, Rebecca J.

AU - Leite, Juliana A.

AU - Leo, Yee Sin

AU - Leung, Gabriel M.

AU - Marklewitz, Marco

AU - Moyo, Sikhulile

AU - Mendez-Rico, Jairo

AU - Melhem, Nada M.

AU - Munster, Vincent

AU - Nahapetyan, Karen

AU - Oh, Djin Ye

AU - Pavlin, Boris I.

AU - Peacock, Thomas P.

AU - Peiris, Malik

AU - Peng, Zhibin

AU - Poon, Leo L.M.

AU - Rambaut, Andrew

AU - Sacks, Jilian

AU - Shen, Yinzhong

AU - Siqueira, Marilda M.

AU - Tessema, Sofonias K.

AU - Volz, Erik M.

AU - Thiel, Volker

AU - van der Werf, Sylvie

AU - Briand, Sylvie

AU - Perkins, Mark D.

AU - Van Kerkhove, Maria D.

AU - Koopmans, Marion P.G.

AU - Agrawal, Anurag

N1 - Funding Information: We acknowledge scientists, public health professionals and Ministries of Health across the world for early generation and sharing of data on SARS-CoV-2 variants.

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N2 - Global sequencing and surveillance capacity for SARS-CoV-2 must be strengthened and combined with multidisciplinary studies of infectivity, virulence and immune escape, in order to track the unpredictable evolution of the ongoing COVID-19 pandemic

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ER -

An early warning system for emerging SARS-CoV-2 variants

Abstract

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