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  • Jacqueline Batley
2018

Brassica 2016 Phenomics to genomics and everything in between

Van De Wouw, A. & Batley, J., 1 Jan 2018, In : Crop and Pasture Science. 69, 1, p. i

Research output: Contribution to journalEditorial

Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus

Alamery, S., Tirnaz, S., Bayer, P., Tollenaere, R., Chaloub, B., Edwards, D. & Batley, J., 1 Jan 2018, In : Crop and Pasture Science. 69, S1, p. 79-93 15 p.

Research output: Contribution to journalConference article

Open Access
File
10 Citations (Scopus)
348 Downloads (Pure)
2019
2016

The genome of a southern hemisphere seagrass species (Zostera muelleri)

Lee, H., Golicz, A. A., Bayer, P. E., Jiao, Y., Tang, H., Paterson, A. H., Sablok, G., Krishnaraj, R. R., Chan, C-K. K., Batley, J., Kendrick, G. A., Larkum, A. W. D., Ralph, P. J. & Edwards, D., Sep 2016, In : Plant Physiology. 172, 1, p. 272-283

Research output: Contribution to journalArticle

Open Access
25 Citations (Scopus)

Genome-wide association study identifies new loci for resistance to leptosphaeria maculans in canola

Raman, H., Raman, R., Coombes, N., Song, J., Diffey, S., Kilian, A., Lindbeck, K., Barbulescu, D. M., Batley, J., Edwards, D., Salisbury, P. A. & Marcroft, S., 24 Oct 2016, In : Frontiers in Plant Science. 7, OCTOBER, 1513.

Research output: Contribution to journalArticle

Open Access
17 Citations (Scopus)
2017

Improvements in Genomic Technologies: Application to Crop Genomics

Yuan, Y., Bayer, P. E., Batley, J. & Edwards, D., Jun 2017, In : Trends in Biotechnology. 35, 6, p. 547-558

Research output: Contribution to journalReview article

25 Citations (Scopus)

Towards CRISPR/Cas crops - bringing together genomics and genome editing

Scheben, A., Wolter, F., Batley, J., Puchta, H. & Edwards, D., Nov 2017, In : New Phytologist. 216, 3, p. 682-698 17 p.

Research output: Contribution to journalReview article

Open Access
85 Citations (Scopus)
409 Downloads (Pure)
2018

Molecular breeding for resistance to black rot [Xanthomonas campestris pv. campestris (Pammel) Dowson] in Brassicas: recent advances

Singh, S., Dey, S. S., Bhatia, R., Batley, J. & Kumar, R., 1 Oct 2018, In : Euphytica. 214, 10, 196.

Research output: Contribution to journalReview article

5 Citations (Scopus)
2019

Variation in abundance of predicted resistance genes in the Brassica oleracea pangenome

Bayer, P. E., Golicz, A. A., Tirnaz, S., Chan, C. K. K., Edwards, D. & Batley, J., Apr 2019, In : Plant Biotechnology Journal. p. 789-800 12 p.

Research output: Contribution to journalArticle

Open Access
15 Citations (Scopus)
2017

Genotyping-by-sequencing approaches to characterize crop genomes: choosing the right tool for the right application

Scheben, A., Batley, J. & Edwards, D., 1 Feb 2017, In : Plant Biotechnology Journal. 15, 2, p. 149-161 13 p.

Research output: Contribution to journalReview article

Open Access
68 Citations (Scopus)
496 Downloads (Pure)
2020

Genotyping for species identification and diversity assessment using double-digest restriction site-associated DNA sequencing (ddRAD-Seq)

Severn-Ellis, A. A., Scheben, A., Neik, T. X., Saad, N. S. M., Pradhan, A. & Batley, J., 1 Jan 2020, Methods in Molecular Biology. Humana Press, p. 159-187 29 p. (Methods in Molecular Biology; vol. 2107).

Research output: Chapter in Book/Conference paperChapter

2016
Open Access
File
19 Citations (Scopus)
370 Downloads (Pure)
2019

Transcriptomic comparison between developing seeds of yellow-And black-seeded Brassica napus reveals that genes influence seed quality

Jiang, J., Zhu, S., Yuan, Y., Wang, Y., Zeng, L., Batley, J. & Wang, Y. P., 16 May 2019, In : BMC Plant Biology. 19, 1, 203.

Research output: Contribution to journalArticle

Open Access
5 Citations (Scopus)

DNA Methylation: Toward Crop Disease Resistance Improvement

Tirnaz, S. & Batley, J., 8 Oct 2019, In : Trends in Plant Science.

Research output: Contribution to journalReview article

3 Citations (Scopus)
2016

Type B heterotrimeric G protein γ subunit regulates 19 auxin and ABA signaling in tomato

Subramaniam, G., Trusov, Y., Lopez-Encina, C., Hayashi, S., Batley, J. & Botella, J. R., 2016, In : Plant Physiology. 170, p. 1117-1134

Research output: Contribution to journalArticle

19 Citations (Scopus)

Molecular-cytogenetic characterization of C-genome chromosome substitution lines in Brassica juncea (L.) Czern and Coss.

Gupta, M., Mason, A. S., Batley, J., Bharti, S., Banga, S. & Banga, S. S., Jun 2016, In : Theoretical and Applied Genetics. 129, 6, p. 1153-1166

Research output: Contribution to journalArticle

4 Citations (Scopus)
2017

Genome analysis identified novel candidate genes for ascochyta blight resistance in chickpea using whole genome re-sequencing data

Li, Y., Ruperao, P., Batley, J., Edwards, D., Davidson, J., Hobson, K. & Sutton, T., 17 Mar 2017, In : Frontiers in Plant Science. 8, 359.

Research output: Contribution to journalArticle

Open Access
14 Citations (Scopus)
2016

Global agricultural intensification during climate change: a role for genomics

Abberton, M., Batley, J., Bentley, A., Bryant, J., Cai, H., Cockram, J., Costa De Oliveira, A., Cseke, L. J., Dempewolf, H., De Pace, C., Edwards, D., Gepts, P., Greenland, A., Hall, A. E., Henry, R., Hori, K., Howe, G. T., Hughes, S., Humphreys, M., Lightfoot, D. & 10 others, Marshall, A., Mayes, S., Nguyen, H. T., Ogbonnaya, F. C., Ortiz, R., Paterson, A. H., Tuberosa, R., Valliyodan, B., Varshney, R. & Yano, M., Apr 2016, In : Plant Biotechnology Journal. 14, 4, p. 1095–1098

Research output: Contribution to journalReview article

Open Access
69 Citations (Scopus)
2019
1 Citation (Scopus)

A differential k-mer analysis pipeline for comparing RNA-Seq transcriptome and meta-transcriptome datasets without a reference

Chan, C. K. K., Rosic, N., Lorenc, M. T., Visendi, P., Lin, M., Kaniewska, P., Ferguson, B. J., Gresshoff, P. M., Batley, J. & Edwards, D., 1 Mar 2019, In : Functional and Integrative Genomics. 19, 2, p. 363-371 9 p.

Research output: Contribution to journalArticle

Assessing Variations in Host Resistance to Fusarium oxysporum f sp. cubense Race 4 in Musa Species, With a Focus on the Subtropical Race 4

Chen, A., Sun, J., Matthews, A., Armas-Egas, L., Chen, N., Hamill, S., Mintoff, S., Tran-Nguyen, L. T. T., Batley, J. & Aitken, E. A. B., 15 May 2019, In : Frontiers in Microbiology. 10, 13 p., 1062.

Research output: Contribution to journalArticle

Open Access
2 Citations (Scopus)
2018

Genetic and molecular regulation of seed storage proteins (SSPs) to improve protein nutritional value of oilseed rape (Brassica napus L.) seeds

Gacek, K., Bartkowiak-Broda, I. & Batley, J., 2 Jul 2018, In : Frontiers in Plant Science. 9, 890.

Research output: Contribution to journalReview article

Open Access
9 Citations (Scopus)
2017

Segregation for fertility and meiotic stability in novel Brassica allohexaploids

Mwathi, M. W., Gupta, M., Atri, C., Banga, S. S., Batley, J. & Mason, A. S., 1 Apr 2017, In : Theoretical and Applied Genetics. 130, 4, p. 767-778

Research output: Contribution to journalArticle

4 Citations (Scopus)
2020

Trait associations in the pangenome of pigeon pea (Cajanus cajan)

Zhao, J., Bayer, P. E., Ruperao, P., Saxena, R. K., Khan, A. W., Golicz, A. A., Nguyen, H. T., Batley, J., Edwards, D. & Varshney, R. K., 5 Feb 2020, In : Plant Biotechnology Journal.

Research output: Contribution to journalArticle

Open Access
2018

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

Hurgobin, B., Golicz, A. A., Bayer, P. E., Chan, C-K. K., Tirnaz, S., Dolatabadian, A., Schiessl, S. V., Samans, B., Montenegro, J. D., Parkin, I. A. P., Pires, J. C., Chalhoub, B., King, G. J., Snowdon, R., Batley, J. & Edwards, D., 10 Jan 2018, In : Plant Biotechnology Journal. p. 1-10

Research output: Contribution to journalArticle

Open Access
30 Citations (Scopus)
2020

Genome-wide analysis of the lateral organ boundaries domain gene family in brassica napus

Xie, T., Zeng, L., Chen, X., Rong, H., Wu, J., Batley, J., Jiang, J. & Wang, Y., 1 Mar 2020, In : Genes. 11, 3, 280.

Research output: Contribution to journalArticle

Open Access
2018
Open Access
21 Citations (Scopus)

Agricultural selection and presence-absence variation in spring-type canola germplasm

Mason, A. S., Chauhan, P., Banga, S., Banga, S. S., Salisbury, P., Barbetti, M. J. & Batley, J., 1 Jan 2018, Crop & Pasture Science: 2016 International Brassica Conference. Van de Wouw, A. & Batley, J. (eds.). 1 ed. Australia: CSIRO Publishing, Vol. 69. p. 55-64 10 p. (Crop and Pasture Science).

Research output: Chapter in Book/Conference paperConference paper

Open Access
File
2 Citations (Scopus)
366 Downloads (Pure)
2017

Current status and challenges in identifying disease resistance genes in Brassica napus

Neik, T. X., Barbetti, M. & Batley, J., 6 Nov 2017, In : Frontiers in Plant Science. 8, p. 1-37 1788.

Research output: Contribution to journalArticle

Open Access
File
15 Citations (Scopus)
433 Downloads (Pure)
2016

Can genomics assist the phenological adaptation of canola to new and changing environments?

Nelson, M. N., Lilley, J. M., Helliwell, C., Taylor, C. M., Siddique, K. H. M., Chen, S., Raman, H., Batley, J. & Cowling, W. A., 29 Mar 2016, In : Crop and Pasture Science. 67, 3-4, p. 284-297 14 p.

Research output: Contribution to journalReview article

9 Citations (Scopus)
2018

Shifting the limits in wheat research and breeding using a fully annotated reference genome

International Wheat Genome Sequencing Consortium (IWGSC), 17 Aug 2018, In : Science. 361, 6403, eaar7191.

Research output: Contribution to journalArticle

Open Access
584 Citations (Scopus)
2019

Integrated physical map of bread wheat chromosome arm 7DS to facilitate gene cloning and comparative studies

Tulpová, Z., Luo, M. C., Toegelová, H., Visendi, P., Hayashi, S., Vojta, P., Paux, E., Kilian, A., Abrouk, M., Bartoš, J., Hajdúch, M., Batley, J., Edwards, D., Doležel, J. & Šimková, H., 25 Jan 2019, In : New Biotechnology. 48, p. 12-19

Research output: Contribution to journalArticle

Open Access
3 Citations (Scopus)