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Article

A GmAOX2b antisense gene compromises vegetative growth and seed production in soybean

Chai, T-T., Simmonds, D., Day, D. A., Colmer, T. & Finnegan, P., 2012, In : Planta. 236, p. 199 - 207

Research output: Contribution to journal › Article

A major locus involved in the formation of the radial oxygen loss barrier in adventitious roots of teosinte Zea nicaraguensis is located on the short-arm of chromosome 3

Watanabe, K., Takahashi, H., Sato, S., Nishiuchi, S., Omori, F., Malik, A. I., Colmer, T. D., Mano, Y. & Nakazono, M., 1 Feb 2017, In : Plant Cell and Environment. 40, 2, p. 304-316 13 p.

Research output: Contribution to journal › Article

20 Citations (Scopus)

Anatomical and biochemical characterisation of a barrier to radial O2 loss in adventitious roots of two contrasting Hordeum marinum accessions

Kotula, L., Schreiber, L., Colmer, T. D. & Nakazono, M., 2017, In : Functional Plant Biology. 44, 9, p. 845-857

Research output: Contribution to journal › Article

17 Citations (Scopus)

Aquatic adventitious root development in partially and completely submerged wetland plants Cotula coronopifolia and Meionectes brownii

Rich, S., Ludwig, M. & Colmer, T., 2012, In : Annals of Botany. 110, p. 405-414

Research output: Contribution to journal › Article

33 Citations (Scopus)

Assessment of ICCV 2 × JG 62 chickpea progenies shows sensitivity of reproduction to salt stress and reveals QTL for seed yield and yield components

Vadez, V., Krishnamurthy, L., Thudi, M., Anuradha, C., Colmer, T., Turner, N., Siddique, K., Gaur, P. M. & Varshney, R. K., 2012, In : Molecular Breeding. June, p. 13pp

Research output: Contribution to journal › Article

50 Citations (Scopus)

Characterization of the multigene family TaHKT 2;1 in bread wheat and the role of gene members in plant Na+ and K+ status

Ariyarathna, H. C. K., Ul Haq, T., Colmer, T. & Francki, M. G., 2014, In : BMC Plant Biology. 14, 1, p. 15pp

Research output: Contribution to journal › Article

Open Access

10 Citations (Scopus)

CO2 and O2 dynamics in leaves of aquatic plants with C3 or CAM photosynthesis - application of a novel CO2 microsensor

Pedersen, O., Colmer, T. D., Garcia-Robledo, E. & Revsbech, N. P., 24 Sep 2018, In : Annals of Botany. 122, 4, p. 605-615 11 p.

Research output: Contribution to journal › Article

8 Citations (Scopus)

Community recommendations on terminology and procedures used in flooding and low oxygen stress research

Sasidharan, R., Bailey-Serres, J., Ashikari, M., Atwell, B. J., Colmer, T. D., Fagerstedt, K., Fukao, T., Geigenberger, P., Hebelstrup, K. H., Hill, R. D., Holdsworth, M. J., Ismail, A. M., Licausi, F., Mustroph, A., Nakazono, M., Pedersen, O., Perata, P., Sauter, M., Shih, M. C., Sorrell, B. K. & 6 others, Striker, G., van Dongen, J. T., Whelan, J., Xiao, S., Visser, E. J. W. & Voesenek, L. A. C. J., 9 Mar 2017, In : New Phytologist. 214, 4, p. 1403–1407

Research output: Contribution to journal › Article

48 Citations (Scopus)

Comparisons of annual pasture legumes in growth, ion regulation and root porosity demonstrate that Melilotus siculus has exceptional tolerance to combinations of salinity and waterlogging

Teakle, N. L., Bowman, S., Barrett-Lennard, E., Real, D. & Colmer, T., 2012, In : Environmental and Experimental Botany. 77, p. 175 - 184

Research output: Contribution to journal › Article

19 Citations (Scopus)

Diel O2 Dynamics in Partially and Completely Submerged Deepwater Rice: Leaf Gas Films Enhance Internodal O2 Status, Influence Gene Expression and Accelerate Stem Elongation for 'Snorkelling' during Submergence

Mori, Y., Kurokawa, Y., Koike, M., Malik, A. I., Colmer, T. D., Ashikari, M., Pedersen, O. & Nagai, K., 1 May 2019, In : Plant & Cell Physiology. 60, 5, p. 973-985 13 p.

Research output: Contribution to journal › Article

4 Citations (Scopus)

Differential responses of three coastal grassland species to seawater flooding

Hanley, M. E., Grove, T. L., Cawthray, G. R. & Colmer, T. D., 1 Apr 2017, In : Journal of Plant Ecology. 10, 2, p. 322-330

Research output: Contribution to journal › Article

14 Citations (Scopus)

Drought tolerances of three stem-succulent halophyte species of an inland semiarid salt lake system

Marchesini, V., Yin, C., Colmer, T. & Veneklaas, E., Nov 2014, In : Functional Plant Biology. 41, 12, p. 1230-1238 9 p.

Research output: Contribution to journal › Article

6 Citations (Scopus)

Effects of organic acids on the formation of the barrier to radial oxygen loss in roots of hordeum marinum

Kotula, L., Colmer, T. & Nakazono, M., 2014, In : Functional Plant Biology. 41, 2, p. 187-202

Research output: Contribution to journal › Article

17 Citations (Scopus)

Energetics of acclimation to NaCl by submerged, anoxic rice seedlings

Kurniasih, B., Greenway, H. & Colmer, T. D., 2017, In : Annals of Botany. 119, 1, p. 129-142 14 p.

Research output: Contribution to journal › Article

7 Citations (Scopus)

Enhanced formation of aerenchyma and induction of a barrier to radial oxygen loss in adventitious roots of Zea nicaraguensis contribute to its waterlogging tolerance as compared with maize (Zea mays ssp. mays)

Abiko, T., Kotula, L., Shiono, K., Malik, A. I., Colmer, T. & Nakazono, M., 2012, In : Plant, Cell and Environment. 35, p. 1618 - 1630

Research output: Contribution to journal › Article

109 Citations (Scopus)

Evaluation of root porosity and radial oxygen loss of disomic addition lines of Hordeum marinum in wheat

Konnerup, D., Malik, A. I. I., Islam, A. K. M. R. & Colmer, T. D., 2017, In : Functional Plant Biology. 44, 4, p. 400-409 10 p.

Research output: Contribution to journal › Article

7 Citations (Scopus)

Gas film retention and underwater photosynthesis during field submergence of four contrasting rice genotypes

Winkel, A., Pedersen, O., Ella, E. S., Ismail, A. M. & Colmer, T., 2014, In : Journal of Experimental Botany. 65, 12, p. 3225-3233

Research output: Contribution to journal › Article

Open Access

43 Citations (Scopus)

Heat stress of two tropical seagrass species during low tides - impact on underwater net photosynthesis, dark respiration and diel in situ internal aeration

Pedersen, O., Colmer, T. D., Borum, J., Zavala-Perez, A. & Kendrick, G. A., 2016, In : New Phytologist. 210, 4, p. 1207-1218 12 p.

Research output: Contribution to journal › Article

55 Citations (Scopus)

Hydraulic redistribution: limitations for plants in saline soils

Bazihizina, N., Veneklaas, E. J., Barrett-Lennard, E. G. & Colmer, T. D., 1 Oct 2017, In : Plant Cell and Environment. 40, 10, p. 2437-2446 10 p.

Research output: Contribution to journal › Article

3 Citations (Scopus)

Investigating drought tolerance in chickpea using genome-wide association mapping and genomic selection based on whole-genome resequencing data

Li, Y., Ruperao, P., Batley, J., Edwards, D., Khan, T., Colmer, T. D., Pang, J., Siddique, K. H. M. & Sutton, T., 19 Feb 2018, In : Frontiers in Plant Science. 9, 190.

Research output: Contribution to journal › Article

Open Access

30 Citations (Scopus)

Large number of flowers and tertiary branches, and higher reproductive success increase yields under salt stress in chickpea

Vadez, V., Rashmi, M., Sindhu, K., Muralidharan, M., Pushpavalli, R., Turner, N., Krishnamurthy, L., Gaur, P. M. & Colmer, T., 2012, In : European Journal of Agronomy. 41, p. 42 - 51

Research output: Contribution to journal › Article

28 Citations (Scopus)

Leaf gas films, underwater photosynthesis and plant species distributions in a flood gradient

Winkel, A., Visser, E. J. W., Colmer, T., Brodersen, K. P., Voesenek, L. A. C. J., Sand-Jensen, K. & Pedersen, O., 2016, In : Plant, Cell and Environment. 39, 7, p. 1537-1548

Research output: Contribution to journal › Article

19 Citations (Scopus)

Leaf gas films contribute to rice (Oryza sativa) submergence tolerance during saline floods

Herzog, M., Konnerup, D., Pedersen, O., Winkel, A. & Colmer, T. D., May 2018, In : Plant Cell and Environment. 41, 5, p. 885-897 13 p.

Research output: Contribution to journal › Article

7 Citations (Scopus)

Life at the boundary: Photosynthesis at the soil-fluid interface. A synthesis focusing on mosses

Raven, J. & Colmer, T., 2016, In : Journal of Experimental Botany. 67, 6, p. 1613-1623

Research output: Contribution to journal › Article

9 Citations (Scopus)

Linking oxygen availability with membrane potential maintenance and K+ retention of barley roots: Implications for waterlogging stress tolerance

Zeng, F., Konnerup, D., Shabala, L., Zhou, M., Colmer, T., Zhang, G. & Shabala, S. N., 18 Aug 2014, In : Plant, Cell and Environment. 37, 10, p. 2325-2338 14 p.

Research output: Contribution to journal › Article

31 Citations (Scopus)

Microarray analysis of laser-microdissected tissues indicates the biosynthesis of suberin in the outer part of roots during formation of a barrier to radial oxygen loss in rice (Oryza sativa)

Shiono, K., Yamauchi, T., Yamazaki, S., Mohanty, B., Malik, I., Nagamura, Y., Nishizawa, N., Tsutsumi, N., Colmer, T. & Nakazono, M., 2014, In : Journal of Experimental Botany. 65, 17, p. 4795-4806

Research output: Contribution to journal › Article

36 Citations (Scopus)

Microsite and litter cover effects on seed banks vary with seed size and dispersal mechanisms: Implications for revegetation of degraded saline land

Farrell, C., Hobbs, R. & Colmer, T., 2012, In : Plant Ecology. 213, p. 1145 - 1155

Research output: Contribution to journal › Article

11 Citations (Scopus)

Neglecting legumes has compromised human health and sustainable food production

Foyer, C., Lam, H. M., Nguyen, H. T., Siddique, K., Varshney, R., Colmer, T., Cowling, W., Bramley, H., Mori, T., Hodgson, J., Cooper, J. W., Miller, A. J., Kunert, K., Vorster, J., Cullis, C., Ozga, J. A., Wahlqvist, M. L., Liang, Y., Shou, H., Shi, K. & 6 others, Yu, J., Fodor, N., Kaiser, B. N., Wong, F. L., Valliyodan, B. & Considine, M., 2 Aug 2016, In : Nature Plants. 2, 8, p. 1-10

Research output: Contribution to journal › Article

Open Access

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228 Citations (Scopus)

781 Downloads (Pure)

Oxygen loss from seagrass roots coincides with colonisation of sulphide-oxidising cable bacteria and reduces sulphide stress

Martin, B. C., Bougoure, J., Ryan, M. H., Bennett, W. W., Colmer, T. D., Joyce, N. K., Olsen, Y. S. & Kendrick, G. A., 23 Oct 2018, In : ISME Journal.

Research output: Contribution to journal › Article

15 Citations (Scopus)

Pattern of water use and seed yield under terminal drought in chickpea genotypes

Pang, J., Turner, N. C., Du, Y-L., Colmer, T. D. & Siddique, K. H. M., 9 Aug 2017, In : Frontiers in Plant Science. 8, 14 p., 1375.

Research output: Contribution to journal › Article

Open Access

9 Citations (Scopus)

Phenotypic variation for productivity and drought tolerance is widespread in germplasm collections of Australian Cullen species

Bennett, R., Colmer, T., Real, D., Renton, M. & Ryan, M., 2012, In : Crop and Pasture Science. 63, p. 656 - 671

Research output: Contribution to journal › Article

6 Citations (Scopus)

Photosynthetic response to globally increasing CO2 of co-occurring temperate seagrass species

Borum, J., Pedersen, O., Kotula, L., Fraser, M., Statton, J., Colmer, T. & Kendrick, G., Jun 2016, In : Plant, Cell and Environment. 39, 6, p. 1240-1250

Research output: Contribution to journal › Article

Open Access

File

27 Citations (Scopus)

837 Downloads (Pure)

PH regulation in anoxic rice coleoptiles at pH 3.5: Biochemical pHstats and net H + influx in the absence and presence of NO 3 -

Greenway, H., Kulichikhin, K. Y., Cawthray, G. & Colmer, T., 2012, In : Journal of Experimental Botany. 63, 5, p. 1969 - 1983

Research output: Contribution to journal › Article

Open Access

10 Citations (Scopus)

Physical gills prevent drowning of many wetland insects, spiders and plants

Pedersen, O. & Colmer, T., 2012, In : Journal of Experimental Biology. 215, p. 705 - 709

Research output: Contribution to journal › Article

31 Citations (Scopus)

Plant growth and physiology under heterogeneous salinity

Bazihizina, N., Barrett-Lennard, E. & Colmer, T., 2012, In : Plant and Soil. 354, 1-2, p. 1-19

Research output: Contribution to journal › Article

71 Citations (Scopus)

Plant responses to heterogeneous salinity: Growth of the halophyte Atriplex nummularia is determined by the root-weighted mean salinity of the root zone

Bazihizina, N., Barrett-Lennard, E. & Colmer, T., 2012, In : Journal of Experimental Botany. 63, p. 6347 - 6358

Research output: Contribution to journal › Article

Open Access

45 Citations (Scopus)

Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits

Varshney, R. K., Thudi, M., Roorkiwal, M., He, W., Upadhyaya, H. D., Yang, W., Bajaj, P., Cubry, P., Rathore, A., Jian, J., Doddamani, D., Khan, A. W., Garg, V., Chitikineni, A., Xu, D., Gaur, P. M., Singh, N. P., Chaturvedi, S. K., Nadigatla, G. V. P. R., Krishnamurthy, L. & 20 others, Dixit, G. P., Fikre, A., Kimurto, P. K., Sreeman, S. M., Bharadwaj, C., Tripathi, S., Wang, J., Lee, S-H., Edwards, D., Polavarapu, K. K. B., Penmetsa, R. V., Crossa, J., Nguyen, H. T., Siddique, K. H. M., Colmer, T. D., Sutton, T., von Wettberg, E., Vigouroux, Y., Xu, X. & Liu, X., May 2019, In : Nature Genetics. 51, 5, p. 857-+ 11 p.

Research output: Contribution to journal › Article

Open Access

41 Citations (Scopus)

Response of chickpea (Cicer arietinum L.) to terminal drought: leaf stomatal conductance, pod abscisic acid concentration, and seed set

Pang, J., Turner, N. C., Khan, T., Du, Y. L., Xiong, J-L., Colmer, T. D., Devilla, R., Stefanova, K. & Siddique, K. H. M., 20 Apr 2016, In : Journal of Experimental Botany. 68, 8, p. 1973-1985 13 p.

Research output: Contribution to journal › Article

Open Access

40 Citations (Scopus)

Responses of rice to Fe2+ in aerated and stagnant conditions: Growth, root porosity and radial oxygen loss barrier

Mongon, J., Konnerup, D., Colmer, T. & Rerkasem, B., 2014, In : Functional Plant Biology. 41, 9, p. 922-929

Research output: Contribution to journal › Article

15 Citations (Scopus)

Revealing the roles of GORK channels and NADPH oxidase in acclimation to hypoxia in Arabidopsis

Wang, F., Chen, Z. H., Liu, X., Colmer, T. D., Shabala, L., Salih, A., Zhou, M. & Shabala, S., 1 Jun 2017, In : Journal of Experimental Botany. 68, 12, p. 3191-3204 14 p.

Research output: Contribution to journal › Article

Open Access

32 Citations (Scopus)

Rice acclimation to soil flooding: Low concentrations of organic acids can trigger a barrier to radial oxygen loss in roots

Colmer, T. D., Kotula, L., Malik, A. I., Takahashi, H., Konnerup, D., Nakazono, M. & Pedersen, O., 1 Jul 2019, In : Plant Cell and Environment. 42, 7, p. 2183-2197 15 p.

Research output: Contribution to journal › Article

7 Citations (Scopus)

Rice leaf hydrophobicity and gas films are conferred by a wax synthesis gene (LGF1) and contribute to flood tolerance

Kurokawa, Y., Nagai, K., Huan, P. D., Shimazaki, K., Qu, H., Mori, Y., Toda, Y., Kuroha, T., Hayashi, N., Aiga, S., Itoh, J. I., Yoshimura, A., Sasaki-Sekimoto, Y., Ohta, H., Shimojima, M., Malik, A. I., Pedersen, O., Colmer, T. D. & Ashikari, M., 1 Jun 2018, In : New Phytologist. 218, 4, p. 1558-1569 12 p.

Research output: Contribution to journal › Article

32 Citations (Scopus)

Root aeration via aerenchymatous phellem: Three-dimensional micro-imaging and radial O 2 profiles in Melilotus siculus

Verboven, P., Pedersen, O., Herremans, E., Ho, Q. T., Nicolaï, B. M., Colmer, T. & Teakle, N., 2012, In : New Phytologist. 193, p. 420-431

Research output: Contribution to journal › Article

46 Citations (Scopus)

Root phenotypes of dwarf and "overgrowth" SLN1 barley mutants, and implications for hypoxic stress tolerance

Moriconi, J., Kotula, L., Santa-Maria, G. E. & Colmer, T. D., 2019, In : Journal of Plant Physiology. 234, p. 60-70 11 p.

Research output: Contribution to journal › Article

2 Citations (Scopus)

Root-zone hypoxia reduces growth of the tropical forage grass Urochloa humidicola in high-nutrient but not low-nutrient conditions

Jiménez, J. D. L. C., Kotula, L., Veneklaas, E. J. & Colmer, T. D., 27 Nov 2019, In : Annals of Botany. 124, 6, p. 1019-1032 14 p.

Research output: Contribution to journal › Article

4 Citations (Scopus)

Salinity tolerance in chickpea is associated with the ability to 'exclude' Na from leaf mesophyll cells

Kotula, L., Clode, P. L., Jimenez, J. D. L. C. & Colmer, T. D., 24 Sep 2019, In : Journal of Experimental Botany. 70, 18, p. 4991-5002 12 p.

Research output: Contribution to journal › Article

Open Access

7 Citations (Scopus)

Salinity tolerances of three succulent halophytes (Tecticornia spp.) differentially distributed along a salinity gradient

Moir-Barnetson, L., Veneklaas, E. & Colmer, T., 7 Jun 2016, In : Functional Plant Biology. 43, 8, p. 739-750

Research output: Contribution to journal › Article

6 Citations (Scopus)

Salinization of the soil solution decreases the further accumulation of salt in the root zone of the halophyte Atriplex nummularia Lindl. growing above shallow saline groundwater

Alharby, H. F., Colmer, T. D. & Barrett-Lennard, E. G., 1 Jan 2018, In : Plant Cell and Environment. 41, 1, p. 99-110 12 p.

Research output: Contribution to journal › Article

8 Citations (Scopus)

Salt accumulation and depletion in the root-zone of the halophyte Atriplex nummularia Lindl.: Influence of salinity, leaf area and plant water use

Al Harby, H. F., Colmer, T. & Barrett-Lennard, E., 2014, In : Plant and Soil. 382, 1-2, p. 31-41

Research output: Contribution to journal › Article

8 Citations (Scopus)

Salt sensitivity in chickpea is determined by sodium toxicity

Khan, H., Siddique, K. H. M. & Colmer, T. D., 2016, In : Planta. 244, 3, p. 623-637 15 p.

Research output: Contribution to journal › Article

14 Citations (Scopus)

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