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  • 2019
  • 2018
  • 2016

Author

  • Jenette Creaney
2019

Advances in pathological diagnosis of mesothelioma: what pulmonologists should know

Louw, A., Badiei, A., Creaney, J., Chai, M. S. & Lee, Y. C. G., 1 Jul 2019, In : Current Opinion in Pulmonary Medicine. 25, 4, p. 354-361 8 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2016

ENOX2-based early detection (ONCOblot) of asbestos-induced malignant mesothelioma 4-10 years in advance of clinical symptoms

Morré, D. J., Hostetler, B., Taggart, D. J., Morré, D. M., Musk, A. W., Robinson, B. W. S. & Creaney, J., 2016, In : Clinical Proteomics. 13, 1

Research output: Contribution to journalArticle

12 Citations (Scopus)
2018

Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 297-312.e12

Research output: Contribution to journalArticle

Open Access
92 Citations (Scopus)
2019

Neo-antigen specific T cell responses indicate the presence of metastases before imaging

Fear, V. S., Forbes, C. A., Chee, J., Ma, S., Neeve, S., Celliers, L., Fisher, S. A., Dick, I., Creaney, J. & Robinson, B. W. S., 10 Oct 2019, In : Scientific Reports. 9, 1, 1 p.

Research output: Contribution to journalArticle

Open Access
2016

Excerpts from the 1st international NTNU symposium on current and future clinical biomarkers of cancer: Innovation and implementation, June 16th and 17th 2016, Trondheim, Norway

Robles, A. I., Olsen, K. S., Tsui, D. W. T., Georgoulias, V., Creaney, J., Dobra, K., Vyberg, M., Minato, N., Anders, R. A., Børresen-Dale, A. L., Zhou, J., Sætrom, P., Nielsen, B. S., Kirschner, M. B., Krokan, H. E., Papadimitrakopoulou, V., Tsamardinos, I. & Røe, O. D., 19 Oct 2016, In : Journal of Translational Medicine. 14, 1, 15 p., 295.

Research output: Contribution to journalArticle

Open Access
2018

Autoimmune antibodies and asbestos exposure: Evidence from Wittenoom, Western Australia

Reid, A., Franklin, P., de Klerk, N., Creaney, J., Brims, F., Musk, B. & Pfau, J., 1 Jul 2018, In : American Journal of Industrial Medicine. 61, 7, p. 615-620 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2019

Malignant Pleural Mesothelioma: an Update for Pulmonologists

Sidhu, C., Louw, A., Brims, F., Creaney, J. & Lee, Y. C. G., Jun 2019, In : Current Pulmonology Reports. 8, 2, p. 40-49 10 p.

Research output: Contribution to journalArticle

2018

Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas

The Cancer Genome Atlas Network, 28 Mar 2018, In : Cell Systems. 6, 3, p. 282-300.e2

Research output: Contribution to journalArticle

Open Access
64 Citations (Scopus)
2019

Identification of a CD8+ T-cell response to a predicted neoantigen in malignant mesothelioma

Sneddon, S., Rive, C. M., Ma, S., Dick, I. M., Allcock, R. J. N., Brown, S. D., Holt, R. A., Watson, M., Leary, S., Lee, Y. C. G., Robinson, B. W. S. & Creaney, J., 1 Jan 2019, In : OncoImmunology. 1684713.

Research output: Contribution to journalArticle

Open Access

Phase II Trial of an Oral FGFR Inhibitor AZD4547 as Second or Third Line Therapy in Malignant Pleural Mesothelioma: Final Results of FRAME Study

Lam, W., Nowak, A., Chen, F., Muruganandan, S., Arunachalam, S., Chin, M., Millward, M., Read, C., Murray, K., Creaney, J. & Lee, Y. C. G., Oct 2019, In : Journal of Thoracic Oncology. 14, 10, p. S342-S342 1 p.

Research output: Contribution to journalAbstract/Meeting Abstract

2018

Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 194-212.e6

Research output: Contribution to journalArticle

Open Access
62 Citations (Scopus)

Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 338-354.e15

Research output: Contribution to journalArticle

Open Access
163 Citations (Scopus)

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 172-180.e3

Research output: Contribution to journalArticle

Open Access
32 Citations (Scopus)

Comprehensive Molecular Characterization of the Hippo Signaling Pathway in Cancer

The Cancer Genome Atlas Research Network, 30 Oct 2018, In : Cell Reports. 25, 5, p. 1304-1317.e5

Research output: Contribution to journalArticle

Open Access
46 Citations (Scopus)

Genomic and Functional Approaches to Understanding Cancer Aneuploidy

The Cancer Genome Atlas Research Network, 9 Apr 2018, In : Cancer Cell. 33, 4, p. 676-689.e3

Research output: Contribution to journalArticle

Open Access
119 Citations (Scopus)

Comprehensive Characterization of Cancer Driver Genes and Mutations

The MC3 Working Group & The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 371-385.e18

Research output: Contribution to journalArticle

Open Access
354 Citations (Scopus)

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

The Cancer Genome Atlas Research Network & Creaney, J., 5 Apr 2018, In : Cell. 173, 2, p. 305-320.e10

Research output: Contribution to journalArticle

Open Access
83 Citations (Scopus)

Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing

Patch, A. M., Nones, K., Kazakoff, S. H., Newell, F., Wood, S., Leonard, C., Holmes, O., Xu, Q., Addala, V., Creaney, J., Robinson, B. W., Fu, S., Geng, C., Li, T., Zhang, W., Liang, X., Rao, J., Wang, J., Tian, M., Zhao, Y. & 7 others, Teng, F., Gou, H., Yang, B., Jiang, H., Mu, F., Pearson, J. V. & Waddell, N., 10 Jan 2018, In : PLoS One. 13, 1, 12 p., e0190264.

Research output: Contribution to journalArticle

Open Access
18 Citations (Scopus)
2016

Longitudinal Measurement of Pleural Fluid Biochemistry and Cytokines in Malignant Pleural Effusions

Thomas, R., Cheah, H., Creaney, J., Turlach, B. & Lee, G., Jun 2016, In : Chest. 149, 6, p. 1494-1500

Research output: Contribution to journalArticle

Open Access
File
13 Citations (Scopus)
270 Downloads (Pure)
2018

Driver Fusions and Their Implications in the Development and Treatment of Human Cancers

The Fusion Analysis Working Group & The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 227-238.e3

Research output: Contribution to journalArticle

Open Access
107 Citations (Scopus)

The Immune Landscape of Cancer

The Cancer Genome Atlas Research Network, 17 Apr 2018, In : Immunity. 48, 4, p. 812-830.e14

Research output: Contribution to journalArticle

Open Access
574 Citations (Scopus)
2016

Secreted primary human malignant mesothelioma exosome signature reflects oncogenic cargo

Greening, D. W., Ji, H., Chen, M., Robinson, B. W. S., Dick, I. M., Creaney, J. & Simpson, R. J., 8 Sep 2016, In : Scientific Reports. 6, 32643 .

Research output: Contribution to journalArticle

Open Access
49 Citations (Scopus)
2019

Body composition and nutritional status in malignant pleural mesothelioma: implications for activity levels and quality of life

Jeffery, E., Lee, Y. C. G., Newton, R. U., Lyons-Wall, P., McVeigh, J., Nowak, A. K., Cheah, H. M., Nguyen, B., Fitzgerald, D. B., Creaney, J., Straker, L. & Peddle-McIntyre, C. J., 1 Oct 2019, In : European Journal of Clinical Nutrition. 73, 10, p. 1412-1421 10 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2018

Malignant cells from pleural fluids in malignant mesothelioma patients reveal novel mutations

Sneddon, S. A., Dick, I. M., Lee, Y. C., Musk, A. W., Allcock, R. J., Waddell, N., Patch, A-M., Pearson, J. V., Holt, R. A., Robinson, B. W. & Creaney, J., May 2018, In : Lung Cancer. 119, p. 64-70

Research output: Contribution to journalArticle

Open Access
7 Citations (Scopus)
2019

Simplified criteria using pleural fluid cholesterol and lactate dehydrogenase to distinguish between exudative and transudative pleural effusions

Lépine, P. A., Thomas, R., Nguyen, S., Lacasse, Y., Cheah, H. M., Creaney, J., Muruganandan, S., Martel, S., Lee, Y. C. G. & Delage, A., 1 Mar 2019, In : Respiration. 7 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
2018

Prognostic significance of the neutrophil to lymphocyte ratio in pleural fluid

Popowicz, N. D., Gregory, C. L., Miranda, A. K., Cheah, H. M., Dick, I. M., Lee, Y. C. G. & Creaney, J., Apr 2018, p. 115.

Research output: Contribution to conferenceAbstract

2016
3 Citations (Scopus)
2018

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

The Cancer Genome Atlas Research Network, 13 Aug 2018, In : Cancer Cell. 34, 2, p. 211-224.e6

Research output: Contribution to journalArticle

Open Access
126 Citations (Scopus)

Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas

The Cancer Genome Atlas Research Network, 9 Apr 2018, In : Cancer Cell. 33, 4, p. 721-735.e8

Research output: Contribution to journalArticle

Open Access
87 Citations (Scopus)

A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-β Superfamily

The Cancer Genome Atlas Research Network, 24 Oct 2018, In : Cell Systems. 7, 4, p. 422-437.e7

Research output: Contribution to journalArticle

Open Access
30 Citations (Scopus)

Integrative molecular characterization of malignant pleural mesothelioma

TCGA Research Network, 1 Dec 2018, In : Cancer Discovery. 8, 12, p. 1549-1565 17 p.

Research output: Contribution to journalArticle

90 Citations (Scopus)

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 313-326.e5

Research output: Contribution to journalArticle

Open Access
118 Citations (Scopus)

Oncogenic Signaling Pathways in The Cancer Genome Atlas

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 321-337.e10

Research output: Contribution to journalArticle

Open Access
399 Citations (Scopus)
2016
1 Citation (Scopus)
2018

Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 181-193.e7

Research output: Contribution to journalArticle

Open Access
123 Citations (Scopus)
2019

MicroRNA Signatures in Malignant Pleural Mesothelioma Effusions

Birnie, K. A., Prele, C. M., Musk, A. W. B., de Klerk, N., Lee, Y. C. G., Fitzgerald, D., Allcock, R. J. N., Thompson, P. J., Creaney, J., Badrian, B. & Mutsaers, S. E., 31 Jul 2019, In : Disease Markers. 9 p., 8628612.

Research output: Contribution to journalArticle

Open Access
2016

Protocol of the Australasian Malignant Pleural Effusion-2 (AMPLE-2) trial: A multicentre randomised study of aggressive versus symptom-guided drainage via indwelling pleural catheters

Azzopardi, M., Thomas, R., Muruganandan, S., Lam, D. C. L., Garske, L. A., Kwan, B. C. H., Rashid Ali, M. R. S., Nguyen, P. T., Yap, E., Horwood, F. C., Ritchie, A. J., Bint, M., Tobin, C. L., Shrestha, R., Piccolo, F., De Chaneet, C. C., Creaney, J., Newton, R. U., Hendrie, D., Murray, K. & 4 others, Read, C. A., Feller-Kopman, D., Maskell, N. A. & Lee, Y. C. G., Jul 2016, In : BMJ Open. 6, 7, 8 p., e011480.

Research output: Contribution to journalArticle

Open Access
11 Citations (Scopus)
2018

A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 386-399.e12

Research output: Contribution to journalArticle

Open Access
58 Citations (Scopus)

Pathogenic Germline Variants in 10,389 Adult Cancers

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 355-370.e14

Research output: Contribution to journalArticle

Open Access
154 Citations (Scopus)

Trace element concentrations in human pleural effusions

Popowicz, N. D., Fitzgerald, D., Joseph, J., Lim, E. M., Cheah, H. M., Butcher, S., Creaney, J. & Lee, Y. C. G., Apr 2018, p. 114.

Research output: Contribution to conferenceAbstract

Bacteria as Novel Anti-Mesothelioma Agents

Lansley, S., Della Vergiliana, J. V., Creaney, J. & Lee, Y., Oct 2018, In : Journal of Thoracic Oncology. 13, 10, p. S750-S750 1 p.

Research output: Contribution to journalAbstract/Meeting Abstract

Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 282-296.e4

Research output: Contribution to journalArticle

Open Access
82 Citations (Scopus)
2019

Immunotherapy strategies for mesothelioma–the role of tumor specific neoantigens in a new era of precision medicine

Ye, L., Ma, S., Robinson, B. W. & Creaney, J., 1 Feb 2019, In : Expert Review of Respiratory Medicine. 13, 2, p. 181-192 12 p.

Research output: Contribution to journalReview article

7 Citations (Scopus)
2018

Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 239-254.e6

Research output: Contribution to journalArticle

Open Access
157 Citations (Scopus)
2016

A novel clinical prediction model for prognosis in malignant pleural mesothelioma using decision tree analysis

Brims, F., Meniawy, T., Duffus, I., De Fonseka, D., Segal, A., Creaney, J., Maskell, N., Lake, R., De Klerk, N. & Nowak, A., 2016, In : Journal of Thoracic Oncology. 11, 4, p. 573-582

Research output: Contribution to journalArticle

Open Access
42 Citations (Scopus)
2019
Open Access
1 Citation (Scopus)
2018

Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer

The Cancer Genome Atlas Network, 5 Apr 2018, In : Cell. 173, 2, p. 291-304.e6

Research output: Contribution to journalArticle

Open Access
300 Citations (Scopus)

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 400-416.e11

Research output: Contribution to journalArticle

Open Access
311 Citations (Scopus)

Systematic Analysis of Splice-Site-Creating Mutations in Cancer

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 270-281.e3

Research output: Contribution to journalArticle

Open Access
52 Citations (Scopus)