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  • 2018
  • 2017
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Author

  • Jenette Creaney
2018

Pan-cancer Alterations of the MYC Oncogene and Its Proximal Network across the Cancer Genome Atlas

The Cancer Genome Atlas Network, 28 Mar 2018, In : Cell Systems. 6, 3, p. 282-300.e2

Research output: Contribution to journalArticle

Open Access
64 Citations (Scopus)

Pan-Cancer Analysis of lncRNA Regulation Supports Their Targeting of Cancer Genes in Each Tumor Context

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 297-312.e12

Research output: Contribution to journalArticle

Open Access
92 Citations (Scopus)

Autoimmune antibodies and asbestos exposure: Evidence from Wittenoom, Western Australia

Reid, A., Franklin, P., de Klerk, N., Creaney, J., Brims, F., Musk, B. & Pfau, J., 1 Jul 2018, In : American Journal of Industrial Medicine. 61, 7, p. 615-620 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)
2017

Immunotherapy for Lung Malignancies: From Gene Sequencing to Novel Therapies

Chee, J., Robinson, B. W. S., Holt, R. A. & Creaney, J., 1 Apr 2017, In : Chest. 151, 4, p. 891-897 7 p.

Research output: Contribution to journalArticle

Open Access
8 Citations (Scopus)
2018

Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing

Patch, A. M., Nones, K., Kazakoff, S. H., Newell, F., Wood, S., Leonard, C., Holmes, O., Xu, Q., Addala, V., Creaney, J., Robinson, B. W., Fu, S., Geng, C., Li, T., Zhang, W., Liang, X., Rao, J., Wang, J., Tian, M., Zhao, Y. & 7 others, Teng, F., Gou, H., Yang, B., Jiang, H., Mu, F., Pearson, J. V. & Waddell, N., 10 Jan 2018, In : PLoS One. 13, 1, 12 p., e0190264.

Research output: Contribution to journalArticle

Open Access
18 Citations (Scopus)

Genomic and Molecular Landscape of DNA Damage Repair Deficiency across The Cancer Genome Atlas

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 239-254.e6

Research output: Contribution to journalArticle

Open Access
157 Citations (Scopus)

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

The Cancer Genome Atlas Research Network, 13 Aug 2018, In : Cancer Cell. 34, 2, p. 211-224.e6

Research output: Contribution to journalArticle

Open Access
126 Citations (Scopus)

Prognostic significance of the neutrophil to lymphocyte ratio in pleural fluid

Popowicz, N. D., Gregory, C. L., Miranda, A. K., Cheah, H. M., Dick, I. M., Lee, Y. C. G. & Creaney, J., Apr 2018, p. 115.

Research output: Contribution to conferenceAbstract

Open Access
3 Citations (Scopus)
2016
1 Citation (Scopus)
2018

Pathogenic Germline Variants in 10,389 Adult Cancers

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 355-370.e14

Research output: Contribution to journalArticle

Open Access
154 Citations (Scopus)
2016

Secreted primary human malignant mesothelioma exosome signature reflects oncogenic cargo

Greening, D. W., Ji, H., Chen, M., Robinson, B. W. S., Dick, I. M., Creaney, J. & Simpson, R. J., 8 Sep 2016, In : Scientific Reports. 6, 32643 .

Research output: Contribution to journalArticle

Open Access
49 Citations (Scopus)

ENOX2-based early detection (ONCOblot) of asbestos-induced malignant mesothelioma 4-10 years in advance of clinical symptoms

Morré, D. J., Hostetler, B., Taggart, D. J., Morré, D. M., Musk, A. W., Robinson, B. W. S. & Creaney, J., 2016, In : Clinical Proteomics. 13, 1

Research output: Contribution to journalArticle

12 Citations (Scopus)
2018

An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 400-416.e11

Research output: Contribution to journalArticle

Open Access
311 Citations (Scopus)

Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines

MC3 Working Group & The Cancer Genome Atlas Research Network, 28 Mar 2018, In : Cell Systems. 6, 3, p. 271-281.e7

Research output: Contribution to journalArticle

Open Access
115 Citations (Scopus)

A Pan-Cancer Analysis of Enhancer Expression in Nearly 9000 Patient Samples

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 386-399.e12

Research output: Contribution to journalArticle

Open Access
58 Citations (Scopus)

Systematic Analysis of Splice-Site-Creating Mutations in Cancer

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 270-281.e3

Research output: Contribution to journalArticle

Open Access
52 Citations (Scopus)

Bacteria as Novel Anti-Mesothelioma Agents

Lansley, S., Della Vergiliana, J. V., Creaney, J. & Lee, Y., Oct 2018, In : Journal of Thoracic Oncology. 13, 10, p. S750-S750 1 p.

Research output: Contribution to journalAbstract/Meeting Abstract

2017

Multiplexed targeted proteomics signature for serum diagnostic of malignant pleural mesothelioma

Cerciello, F., Choi, M., Lomeo, K., Amann, J. M., Felley-Bosco, E., Stahel, R. A., Robinson, B., Creaney, J., Pass, H. I., Vitek, O. & Carbone, D. P., Sep 2017, In : Annals of Oncology. 28, 1 p.

Research output: Contribution to journalAbstract/Meeting Abstract

Malignant pleural fluid from mesothelioma has potent biological activities

Cheah, H. M., Lansley, S. M., Varano della Vergiliana, J. F., Tan, A. L., Thomas, R., Leong, S. L., Creaney, J. & Lee, Y. C. G., 1 Jan 2017, In : Respirology. 22, 1, p. 192-199 8 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

SEROUS RETINAL DETACHMENT DUE TO FIBROBLAST GROWTH FACTOR RECEPTOR INHIBITOR IN MALIGNANT PLEURAL MESOTHELIOMA

Arunachalam, S., Lam, W-S., Nowak, A., Creaney, J., Millward, M., Muruganandan, S., Read, C., Lee, G. & Chen, F., Oct 2017, In : Clinical & Experimental Ophthalmology. 45, p. 135-135 1 p.

Research output: Contribution to journalAbstract/Meeting Abstract

8 Citations (Scopus)
2018

Malignant cells from pleural fluids in malignant mesothelioma patients reveal novel mutations

Sneddon, S. A., Dick, I. M., Lee, Y. C., Musk, A. W., Allcock, R. J., Waddell, N., Patch, A-M., Pearson, J. V., Holt, R. A., Robinson, B. W. & Creaney, J., May 2018, In : Lung Cancer. 119, p. 64-70

Research output: Contribution to journalArticle

Open Access
7 Citations (Scopus)
2016

Longitudinal Measurement of Pleural Fluid Biochemistry and Cytokines in Malignant Pleural Effusions

Thomas, R., Cheah, H., Creaney, J., Turlach, B. & Lee, G., Jun 2016, In : Chest. 149, 6, p. 1494-1500

Research output: Contribution to journalArticle

Open Access
File
13 Citations (Scopus)
269 Downloads (Pure)
2018

The Immune Landscape of Cancer

The Cancer Genome Atlas Research Network, 17 Apr 2018, In : Immunity. 48, 4, p. 812-830.e14

Research output: Contribution to journalArticle

Open Access
574 Citations (Scopus)

Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 172-180.e3

Research output: Contribution to journalArticle

Open Access
32 Citations (Scopus)

A Pan-Cancer Analysis Reveals High-Frequency Genetic Alterations in Mediators of Signaling by the TGF-β Superfamily

The Cancer Genome Atlas Research Network, 24 Oct 2018, In : Cell Systems. 7, 4, p. 422-437.e7

Research output: Contribution to journalArticle

Open Access
30 Citations (Scopus)

Oncogenic Signaling Pathways in The Cancer Genome Atlas

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 321-337.e10

Research output: Contribution to journalArticle

Open Access
399 Citations (Scopus)

Comprehensive Characterization of Cancer Driver Genes and Mutations

The MC3 Working Group & The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 371-385.e18

Research output: Contribution to journalArticle

Open Access
354 Citations (Scopus)

Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 194-212.e6

Research output: Contribution to journalArticle

Open Access
62 Citations (Scopus)
2016

A novel clinical prediction model for prognosis in malignant pleural mesothelioma using decision tree analysis

Brims, F., Meniawy, T., Duffus, I., De Fonseka, D., Segal, A., Creaney, J., Maskell, N., Lake, R., De Klerk, N. & Nowak, A., 2016, In : Journal of Thoracic Oncology. 11, 4, p. 573-582

Research output: Contribution to journalArticle

Open Access
42 Citations (Scopus)
2017

Calretinin as a blood-based biomarker for mesothelioma

Johnen, G., Gawrych, K., Raiko, I., Casjens, S., Pesch, B., Weber, D. G., Taeger, D., Lehnert, M., Kollmeier, J., Bauer, T., Musk, A. W., Robinson, B. W. S., Brüning, T. & Creaney, J., 30 May 2017, In : BMC Cancer. 17, 1, 12 p., 386.

Research output: Contribution to journalArticle

Open Access
16 Citations (Scopus)
2018

A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers

The Cancer Genome Atlas Research Network, 9 Apr 2018, In : Cancer Cell. 33, 4, p. 690-705.e9

Research output: Contribution to journalArticle

Open Access
113 Citations (Scopus)

Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 282-296.e4

Research output: Contribution to journalArticle

Open Access
82 Citations (Scopus)

Driver Fusions and Their Implications in the Development and Treatment of Human Cancers

The Fusion Analysis Working Group & The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 227-238.e3

Research output: Contribution to journalArticle

Open Access
107 Citations (Scopus)

Cell-of-Origin Patterns Dominate the Molecular Classification of 10,000 Tumors from 33 Types of Cancer

The Cancer Genome Atlas Network, 5 Apr 2018, In : Cell. 173, 2, p. 291-304.e6

Research output: Contribution to journalArticle

Open Access
300 Citations (Scopus)

Comparative Molecular Analysis of Gastrointestinal Adenocarcinomas

The Cancer Genome Atlas Research Network, 9 Apr 2018, In : Cancer Cell. 33, 4, p. 721-735.e8

Research output: Contribution to journalArticle

Open Access
87 Citations (Scopus)
2016

Excerpts from the 1st international NTNU symposium on current and future clinical biomarkers of cancer: Innovation and implementation, June 16th and 17th 2016, Trondheim, Norway

Robles, A. I., Olsen, K. S., Tsui, D. W. T., Georgoulias, V., Creaney, J., Dobra, K., Vyberg, M., Minato, N., Anders, R. A., Børresen-Dale, A. L., Zhou, J., Sætrom, P., Nielsen, B. S., Kirschner, M. B., Krokan, H. E., Papadimitrakopoulou, V., Tsamardinos, I. & Røe, O. D., 19 Oct 2016, In : Journal of Translational Medicine. 14, 1, 15 p., 295.

Research output: Contribution to journalArticle

Open Access
2017

A proteomic analysis of the malignant mesothelioma secretome using iTRAQ

Creaney, J., Dick, I. M., Leon, J. S. & Robinson, B. W. S., 1 Mar 2017, In : Cancer Genomics and Proteomics. 14, 2, p. 103-117 15 p.

Research output: Contribution to journalArticle

Open Access
14 Citations (Scopus)
2016
3 Citations (Scopus)
2018

Genomic and Functional Approaches to Understanding Cancer Aneuploidy

The Cancer Genome Atlas Research Network, 9 Apr 2018, In : Cancer Cell. 33, 4, p. 676-689.e3

Research output: Contribution to journalArticle

Open Access
119 Citations (Scopus)

Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation

The Cancer Genome Atlas Research Network, 5 Apr 2018, In : Cell. 173, 2, p. 338-354.e15

Research output: Contribution to journalArticle

Open Access
163 Citations (Scopus)

Integrative molecular characterization of malignant pleural mesothelioma

TCGA Research Network, 1 Dec 2018, In : Cancer Discovery. 8, 12, p. 1549-1565 17 p.

Research output: Contribution to journalArticle

90 Citations (Scopus)

Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics

The Cancer Genome Atlas Research Network & Creaney, J., 5 Apr 2018, In : Cell. 173, 2, p. 305-320.e10

Research output: Contribution to journalArticle

Open Access
83 Citations (Scopus)

Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 181-193.e7

Research output: Contribution to journalArticle

Open Access
123 Citations (Scopus)
2017
Open Access
38 Citations (Scopus)
2018

lncRNA Epigenetic Landscape Analysis Identifies EPIC1 as an Oncogenic lncRNA that Interacts with MYC and Promotes Cell-Cycle Progression in Cancer

The Cancer Genome Atlas Research Network, 9 Apr 2018, In : Cancer Cell. 33, 4, p. 706-720.e9

Research output: Contribution to journalArticle

Open Access
150 Citations (Scopus)

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

The Cancer Genome Atlas Research Network, 3 Apr 2018, In : Cell Reports. 23, 1, p. 313-326.e5

Research output: Contribution to journalArticle

Open Access
118 Citations (Scopus)

Comprehensive Molecular Characterization of the Hippo Signaling Pathway in Cancer

The Cancer Genome Atlas Research Network, 30 Oct 2018, In : Cell Reports. 25, 5, p. 1304-1317.e5

Research output: Contribution to journalArticle

Open Access
46 Citations (Scopus)
2017

A Phase II Trial of the Oral FGF Receptor Inhibitor AZD4547 as 2nd or 3rd Line Therapy in Malignant Pleural Mesothelioma - Trial in Progress

Lam, W-S., Lee, Y. C. G., Creaney, J., Muruganandan, S., Millward, M., Read, C. & Nowak, A., Jan 2017, In : Journal of Thoracic Oncology. 12, 1, p. S1087-S1087 1 p.

Research output: Contribution to journalAbstract/Meeting Abstract

2018

Trace element concentrations in human pleural effusions

Popowicz, N. D., Fitzgerald, D., Joseph, J., Lim, E. M., Cheah, H. M., Butcher, S., Creaney, J. & Lee, Y. C. G., Apr 2018, p. 114.

Research output: Contribution to conferenceAbstract