Transcription factor - enhancer - promoter based regulatory networks

Project Details

StatusFinished
Effective start/end date1/01/16 → 31/12/19

Funding

  • ARC Australian Research Council : A$456,900.00

Access Project

  • MaxHiC: A robust background correction model to identify biologically relevant chromatin interactions in Hi-C and capture Hi-C experiments

    Alinejad-Rokny, H., Modegh, R. G., Rabiee, H. R., Sarbandi, E. R., Rezaie, N., Tam, K. T. & Forrest, A. R. R., Jun 2022, In: PLoS Computational Biology. 18, 6, e1010241.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    8 Citations (Web of Science)

  • An integrated expression atlas of miRNAs and their promoters in human and mouse

    de Rie, D., Abugessaisa, I., Alam, T., Arner, E., Arner, P., Ashoor, H., Astrom, G., Babina, M., Bertin, N., Burroughs, A. M., Carlisle, A. J., Daub, C. O., Detmar, M., Deviatiiarov, R., Fort, A., Gebhard, C., Goldowitz, D., Guhl, S., Ha, T. J. & Harshbarger, J. & 50 others, Hasegawa, A., Hashimoto, K., Herlyn, M., Heutink, P., Hitchens, K. J., Hon, C. C., Huang, E., Ishizu, Y., Kai, C., Kasukawa, T., Klinken, P., Lassmann, T., Lecellier, C.-H., Lee, W., Lizio, M., Makeev, V., Mathelier, A., Medvedeva, Y. A., Mejhert, N., Mungall, C. J., Noma, S., Ohshima, M., Okada-Hatakeyama, M., Persson, H., Rizzu, P., Roudnicky, F., Saetrom, P., Sato, H., Severin, J., Shin, J. W., Swoboda, R. K., Tarui, H., Toyoda, H., Vitting-Seerup, K., Winteringham, L., Yamaguchi, Y., Yasuzawa, K., Yoneda, M., Yumoto, N., Zabierowski, S., Zhang, P. G., Wells, C. A., Summers, K. M., Kawaji, H., Sandelin, A., Rehli, M., Hayashizaki, Y., Carninci, P., Forrest, A. R. R. & de Hoon, M. J. L., 1 Sept 2017, In: Nature Biotechnology. 35, 9, p. 872–878 7 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    417 Citations (Scopus)