Personal profile
Biography
PhD in Plant Biology (1994) University of California (Davis)
BSc. Agric. First Class Honours (1990) The University of Western Australia
Roles and responsibilities
The Senior Deputy Vice-Chancellor works with the Vice-Chancellor, and as a member of the UWA Executive Team, to provide leadership and management of the UWA College of Schools. The SDVC works collaboratively with the Heads of Schools to ensure alignment of resources and academic initiatives in the delivery of the University's strategic plan. The initiatives in Schools are supported by close interactions with leaders and staff in the various directorates and portfolios at UWA, and benefit from our strong relationships with other organisations and community members.
Board Member of Harry Perkins Institute of Medical Research (2022-present); Board Member of VenuesWest (2023-present).
Funding overview
I previously led a research laboratory supported by a series of competitive grants from: ARC-Discovery, ARC-ITRH, ARC-Linkage, GRDC (including via Salinity CRC and FFI CRC), HAL, ACIAR, Australia-India Strategic Research Fund, and others.
Involved in various NCRIS funding proposals as PVCR, and in assisting some research funding initiatives as DVCR.
Previous positions
Deputy Vice-Chancellor, Research (Dec 2019-Dec 2021)
Acting Pro Vice-Chancellor, Research (Aug 2018-Nov 2019)
Coordinator of Master of Agricultural Science (2014-2018)
Head, School of Plant Biology (2013-2015)
Postgraduate Coordinator, School of Plant Biology (2010-2013)
Deputy Head, School of Plant Biology (2009-2012)
Associate Dean, Teaching & Learning, Faculty of Natural & Agricultural Sciences (2005-2007)
Australasian Editor of Annals of Botany; Handling Editor of Journal of Experimental Botany (2011-2020)
President of the Australian Society of Plant Scientists (2013 & 2014)
International Committee of the International Society for Plant Anaerobiosis (2003-2016)
Teaching overview
Plant Physiology, especially plant responses and adaptations to adverse environments in agricultural and natural systems in the context of solving problems. Inter-disciplinary approaches to problem solving are emphasised. Evaluation of the scientific literature and group discussions are used as teaching tools. Laboratory- and field-based teaching provides hands-on experience in techniques, experimental design, and data interpretation and science communication. I am currently not teaching, but previously taught and jointly coordinated units in Biology (Level 1), Plant Physiology (Level 2), Plant Ecophysiology (Level 3), and International Agriculture Research & Development (Level 4). I previously supervised research project students (Honours & Masters) and MSc and PhD researchers.
Research
Focus was on the identification of physiological and biochemical traits associated with plant adaptation to salinity and flooding, and the regulation of these traits. Research ranged from cellular to eco-physiological processes since the elucidation of mechanisms at several levels of organisation is essential to gain an integrative understanding of whole plant adaptation. Collaborative, multi-disciplinary research involved many students (PhD/MSc/Master&Hons projects) and partnerships with key Local, National and International scientists.
Research on flooding stress focused on anoxia tolerance using rice coleoptiles as a model system, and on oxygen movement in the aerenchyma in roots of crops, pasture species, and wetland plants. Research on salt tolerance focused on the regulation of tissue concentrations of organic solutes and Na and Cl in wheat and its wild relatives, pasture species, and Australian halophytes. Nutrient and water management in turf was also a research theme in collaboration with a soil scientist.
Industry keywords
- Agriculture and Food
Research expertise keywords
- Physiology of plant roots
- Plant physiology/ecology
- Salinity and flooding tolerance in crops and halophytes
- Water and nutrient management in turf
Expertise related to UN Sustainable Development Goals
In 2015, UN member states agreed to 17 global Sustainable Development Goals (SDGs) to end poverty, protect the planet and ensure prosperity for all. This person’s work contributes towards the following SDG(s):
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SDG 2 Zero Hunger
Fingerprint
- 1 Similar Profiles
Collaborations and top research areas from the last five years
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Genetic diversity and candidate genes for transient waterlogging tolerance in mungbean at the germination and seedling stages
Kyu, K. L., Taylor, C. M., Douglas, C. A., Malik, A. I., Colmer, T. D., Siddique, K. H. M. & Erskine, W., 21 Mar 2024, In: Frontiers in Plant Science. 15, 17 p., 1297096.Research output: Contribution to journal › Article › peer-review
Open Access9 Link opens in a new tab Citations (Scopus) -
NaCl-induced effects on photosynthesis, ion relations, and growth of Chloris gayana Kunth in the presence of two levels of KCl
Bezerra, A. C. M., Kotula, L., Ortiz-Silva, B., Medici, L. O., Colmer, T. D. & Reinert, F., Nov 2024, In: Plant Physiology and Biochemistry. 216, 109136.Research output: Contribution to journal › Article › peer-review
2 Link opens in a new tab Citations (Scopus) -
Overcoming constraints to measuring O2 diffusivity and consumption of intact roots
Jiménez, J. D. L. C., Armstrong, W., Colmer, T. D. & Pedersen, O., May 2024, In: Plant Physiology. 195, 1, p. 283-286 4 p.Research output: Contribution to journal › Letter › peer-review
Open Access9 Link opens in a new tab Citations (Web of Science) -
Comparative transcriptome analysis reveals molecular regulation of salt tolerance in two contrasting chickpea genotypes
Khan, H. A., Sharma, N., Siddique, K. H. M., Colmer, T. D., Sutton, T. & Baumann, U., 2023, In: Frontiers in Plant Science. 14, 1191457.Research output: Contribution to journal › Article › peer-review
Open Access12 Link opens in a new tab Citations (Scopus) -
Superior salt tolerance in wild soybean (G. soja) is associated with better ion ‘exclusion’ ability from leaves and mesophyll cells than cultivated soybean genotypes (G. max)
Thanh Le, L. T., Kotula, L., Colmer, T. D. & Siddique, K. H. M., Jul 2023, In: Environmental and Experimental Botany. 211, 105348.Research output: Contribution to journal › Article › peer-review
4 Link opens in a new tab Citations (Scopus)
Datasets
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Data from: Drivers of plant traits that allow survival in wetlands
Pan, Y. (Creator), Cieraad, E. (Creator), Clarkson, B. (Creator), Colmer, T. (Creator), Pedersen, O. (Creator), Visser, E. (Creator), Voesenek, L. A. C. J. (Creator) & van Bodegom, P. M. (Creator), DRYAD, 1 Jan 2020
DOI: 10.5061/dryad.7h44j0zqx, http://datadryad.org/stash/dataset/doi:10.5061/dryad.7h44j0zqx
Dataset
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The leaf economics spectrum revisited: global trait patterns in wetlands
Yingji, P. (Creator), Cieraad, E. (Creator), Armstrong, J. (Contributor), Armstrong, W. (Contributor), Clarkson, B. (Creator), Colmer, T. (Contributor), Pedersen, O. (Contributor), Visser, E. (Contributor), Voesenek, L. A. C. J. (Creator), Van Bodegom, P. (Creator) & Pan, Y. (Creator), DRYAD, 22 Jul 2020
DOI: 10.5061/dryad.v6wwpzgsq, http://datadryad.org/stash/dataset/doi:10.5061/dryad.v6wwpzgsq and one more link, https://zenodo.org/record/3964849 (show fewer)
Dataset
Projects
- 57 Finished
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Agriculture Research Data Cloud
Taylor, N. (Investigator 01), Biddulph, B. (Investigator 02), Millar, H. (Investigator 03), Callow, N. (Investigator 04), Colmer, T. (Investigator 05) & Leske, B. (Investigator 06)
Australian Research Data Commons ARDC
1/06/18 → 31/05/19
Project: Research
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Rice and seagrass roots in anoxic sediments: coping with soil phytotoxins for productive wetland crops and aquatic ecosystems
Colmer, T. (Chief Investigator), Kendrick, G. (Investigator 02), Pedersen, O. (Investigator 03), Nakazono, M. (Investigator 04) & Takahashi, H. (Investigator 05)
The University of Western Australia
1/01/17 → 31/12/17
Project: Research
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Gustavo Striker to visit UWA for research on submergence tolerance of messina
Colmer, T. (Investigator 01)
1/01/17 → 31/12/17
Project: Research
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Exploring the Scope for New Crop Suitability at Marvel Loch, Western Australia
Siddique, K. (Investigator 01), Johansen, C. (Investigator 02) & Colmer, T. (Investigator 03)
26/09/16 → 15/11/16
Project: Research
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Incorporating salt-tolerant wheat and pulses into smallholder farming systems in southern Bangladesh
Erskine, W. (Investigator 01) & Colmer, T. (Investigator 02)
Department of Foreign Affairs & Trade
1/07/16 → 31/03/23
Project: Research