Sam Buckberry

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Research Output 2012 2019

19 Article
1 Chapter
1 Comment/debate
1 Literature review

Convergent evolution of a vertebrate-like methylome in a marine sponge

de Mendoza, A., Hatleberg, W. L., Pang, K., Leininger, S., Bogdanovic, O., Pflueger, J., Buckberry, S., Technau, U., Hejnol, A., Adamska, M., Degnan, B. M., Degnan, S. M. & Lister, R., Oct 2019, In : Nature Ecology and Evolution. 3, 10, p. 1464-1473 10 p.

Research output: Contribution to journal › Article

convergent evolution

Porifera

sponge

vertebrate

genome

1 Citation (Scopus)

Approaches for the analysis and interpretation of whole genome bisulfite sequencing data

Stuart, T., Buckberry, S. & Lister, R., 2018, Epigenome Editing: Methods and Protocols. Jeltsch, A. & Rots, M. G. (eds.). New York: Springer, Vol. 1767. p. 299-310 12 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Conference paper › Chapter

DNA Methylation

Genome

Cytosine

DNA Transposable Elements

DNA

Erratum: Author Correction: Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons (Nature communications (2018) 9 1 (1341))

de Mendoza, A., Bonnet, A., Vargas-Landin, D. B., Ji, N., Li, H., Yang, F., Li, L., Hori, K., Pflueger, J., Buckberry, S., Ohta, H., Rosic, N., Lesage, P., Lin, S. & Lister, R., 1 May 2018, In : Nature Communications. 9, 1, 1 p.

Research output: Contribution to journal › Comment/debate

Open Access

document markup languages

Retroelements

HTML

Cytosine

Methyltransferases

MsgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data

Mayne, B. T., Leemaqz, S. Y., Buckberry, S., Rodriguez Lopez, C. M., Roberts, C. T., Bianco-Miotto, T. & Breen, J., 1 Dec 2018, In : Scientific Reports. 8, 1, 2190.

Research output: Contribution to journal › Article

Open Access

Methylation

DNA Methylation

Enzymes

Genome

RNA Sequence Analysis

4 Citations (Scopus)

Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons

de Mendoza, A., Bonnet, A., Vargas-Landin, D. B., Ji, N., Li, H., Yang, F., Li, L., Hori, K., Pflueger, J., Buckberry, S., Ohta, H., Rosic, N., Lesage, P., Lin, S. & Lister, R., 1 May 2018, In : Nature Communications. 9, 1, 1 p., 1341.

Research output: Contribution to journal › Article

Open Access

Retroelements

methylation

Cytosine

Methyltransferases

eukaryotes