Sam Buckberry

Dr, BSc, BHlthSc(Hons), PhD, Mr

  • The University of Western Australia (M316), 35 Stirling Highway,

    6009 Perth

    Australia

20122018
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  • 6 Similar Profiles
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Genome Medicine & Life Sciences

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Research Output 2012 2018

1 Citation (Scopus)

Approaches for the analysis and interpretation of whole genome bisulfite sequencing data

Stuart, T., Buckberry, S. & Lister, R., 2018, Epigenome Editing: Methods and Protocols. Jeltsch, A. & Rots, M. G. (eds.). New York: Springer, Vol. 1767. p. 299-310 12 p. (Methods in Molecular Biology).

Research output: Chapter in Book/Conference paperChapter

DNA Methylation
Genome
Cytosine
DNA Transposable Elements
DNA

Erratum: Author Correction: Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons (Nature communications (2018) 9 1 (1341))

de Mendoza, A., Bonnet, A., Vargas-Landin, D. B., Ji, N., Li, H., Yang, F., Li, L., Hori, K., Pflueger, J., Buckberry, S., Ohta, H., Rosic, N., Lesage, P., Lin, S. & Lister, R., 1 May 2018, In : Nature Communications. 9, 1, 1 p.

Research output: Contribution to journalComment/debate

Open Access
document markup languages
Retroelements
HTML
Cytosine
Methyltransferases

MsgbsR: An R package for analysing methylation-sensitive restriction enzyme sequencing data

Mayne, B. T., Leemaqz, S. Y., Buckberry, S., Rodriguez Lopez, C. M., Roberts, C. T., Bianco-Miotto, T. & Breen, J., 1 Dec 2018, In : Scientific Reports. 8, 1, 2190.

Research output: Contribution to journalArticle

Open Access
Methylation
DNA Methylation
Enzymes
Genome
RNA Sequence Analysis
2 Citations (Scopus)

Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons

de Mendoza, A., Bonnet, A., Vargas-Landin, D. B., Ji, N., Li, H., Yang, F., Li, L., Hori, K., Pflueger, J., Buckberry, S., Ohta, H., Rosic, N., Lesage, P., Lin, S. & Lister, R., 1 May 2018, In : Nature Communications. 9, 1, 1 p., 1341.

Research output: Contribution to journalArticle

Open Access
Retroelements
methylation
Cytosine
Methyltransferases
eukaryotes
10 Citations (Scopus)

Cell Type of Origin Dictates the Route to Pluripotency

Nefzger, C. M., Rossello, F. J., Chen, J., Liu, X., Knaupp, A. S., Firas, J., Paynter, J. M., Pflueger, J., Buckberry, S., Lim, S. M., Williams, B., Alaei, S., Faye-Chauhan, K., Petretto, E., Nilsson, S. K., Lister, R., Ramialison, M., Powell, D. R., Rackham, O. J. L. & Polo, J. M., 5 Dec 2017, In : Cell Reports. 21, 10, p. 2649-2660 12 p.

Research output: Contribution to journalArticle

Open Access
Fibroblasts
Stem cells
Induced Pluripotent Stem Cells
Epithelial-Mesenchymal Transition
Keratinocytes

Datasets

GSM2043606: villous_S9

Buckberry, S. (Creator), Roberts, C. T. (Creator), Gene Expression Omnibus (NCBI), 31 Aug 2016

Dataset

GSM2043601: villous_S4

Buckberry, S. (Creator), Roberts, C. T. (Creator), Gene Expression Omnibus (NCBI), 31 Aug 2016

Dataset

GSM2043602: villous_S5

Buckberry, S. (Creator), Roberts, C. T. (Creator), Gene Expression Omnibus (NCBI), 31 Aug 2016

Dataset

GSM2043599: villous_S2

Buckberry, S. (Creator), Roberts, C. T. (Creator), Gene Expression Omnibus (NCBI), 31 Aug 2016

Dataset

GSM2043611: villous_S14

Buckberry, S. (Creator), Roberts, C. T. (Creator), Gene Expression Omnibus (NCBI), 31 Aug 2016

Dataset

Projects 2016 2018

Prizes

Raine Research Prize

Sam Buckberry (Recipient), 2019

Prize

Western Australia