Philipp Bayer

Dr

  • The University of Western Australia (M092), 35 Stirling Highway,

    6009 Crawley

    Australia

  • 631 Citations
  • 8 h-Index
20132018
If you made any changes in Pure these will be visible here soon.

Personal profile

Biography

In 2015 I finished my PhD at UQ creating a novel genotyping--by-sequencing method called skimGBS. I then moved to UWA to work with the Edwards group on plant breeding using computational methods.

Roles and responsibilities

I'm a postdoctoral researcher in the group of Dave Edwards - I run my own research, help PhD students with their research,

I also run the Hacky Hour, every Friday at the Hackett Hall Cafe at 10am, where we talk code and data and help people with code and data problems: http://twitter.com/hackyhouruwa

I also am a (co-)Head of a EMBL-ABR Node

Funding overview

UWA Research Collaboration Award, 'Microbe mediated alternative Nitrogen nutrition in Australian seagrasses', $29,950

Industrial relevance

Our group collaborates extensively with international breeding companies such as Bayer CropScience and Intergrain.

Research

Plant genomics, plant pangenomics, computer-assisted breeding programs, Brassica, wheat, legumes, seagrasses

Languages

English
German
French
Japanese

Fingerprint Fingerprint is based on mining the text of the person's scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 5 Similar Profiles
Genome Medicine & Life Sciences
Brassica napus Medicine & Life Sciences
genome Agriculture & Biology
Genes Medicine & Life Sciences
genes Agriculture & Biology
Single Nucleotide Polymorphism Medicine & Life Sciences
Gene Conversion Medicine & Life Sciences
Brassica Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Projects 2018 2018

Research Output 2013 2018

Exploring the genetic and adaptive diversity of a pan-Mediterranean crop wild relative: narrow-leafed lupin

Mousavi-Derazmahalleh, M., Bayer, P. E., Nevado, B., Hurgobin, B., Filatov, D., Kilian, A., Kamphuis, L. G., Singh, K. B., Berger, J. D., Hane, J. K., Edwards, D., Erskine, W. & Nelson, M. N. Apr 2018 In : Theoretical and Applied Genetics. 131, 4, p. 887–901 15 p.

Research output: Contribution to journalArticle

Open Access
Mediterranean Region
Lupinus
wild relatives
Climate Change
Genome-Wide Association Study
1 Citations

Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus

Alamery, S., Tirnaz, S., Bayer, P., Tollenaere, R., Chaloub, B., Edwards, D. & Batley, J. 1 Jan 2018 In : Crop and Pasture Science. 69, 1, p. 79-93 15 p.

Research output: Contribution to journalArticle

Brassica napus
leucine
binding sites
nucleotides
genome
1 Citations

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

Hurgobin, B., Golicz, A. A., Bayer, P. E., Chan, C-K. K., Tirnaz, S., Dolatabadian, A., Schiessl, S. V., Samans, B., Montenegro, J. D., Parkin, I. A. P., Pires, J. C., Chalhoub, B., King, G. J., Snowdon, R., Batley, J. & Edwards, D. 10 Jan 2018 In : Plant Biotechnology Journal. p. 1-10

Research output: Contribution to journalArticle

Open Access
Brassica napus
major genes
Genes
genes
Glucosinolates
17 Citations

A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant–microbe interactions and legume evolution

Hane, J. K. , Ming, Y. , Kamphuis, L. G. , Nelson, M. N. , Garg, G. , Atkins, C. A. , Bayer, P. E. , Bravo, A. , Bringans, S. D. , Cannon, S. , Edwards, D. , Foley, R. , Gao, L. L. , Harrison, M. J. , Huang, W. , Hurgobin, B. , Li, S. , Liu, C. W. , McGrath, A. , Morahan, G. & 4 others Murray, J., Weller, J. L., Jian, J. & Singh, K. B. 1 Mar 2017 In : Plant Biotechnology Journal. 15, 3, p. 318-330 13 p.

Research output: Contribution to journalArticle

Open Access
Lupinus
Lupinus angustifolius
health foods
Fabaceae
legumes
4 Citations

An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance

Kaur, P., Bayer, P. E., Milec, Z., Vrána, J., Yuan, Y., Appels, R., Edwards, D., Batley, J., Nichols, P., Erskine, W. & Doležel, J. 12 Jul 2017 In : Plant Biotechnology Journal. 15, 8, p. 1034-1046 13 p.

Research output: Contribution to journalArticle

Open Access
Trifolium
Trifolium subterraneum
agronomic traits
Medicago
Genome

Datasets

Assembly and comparison of two closely related Brassica napus genomes

Bayer, P. (Creator), Hurgobin, B. (Creator), Golicz, A. A. (Creator), Chan, C. K. (Creator), Yuan, Y. (Creator), Lee, H. (Creator), Renton, M. (Creator), Meng, J. (Creator), Li, R. (Creator), Long, Y. (Creator), Zou, J. (Creator), Bancroft, I. (Creator), Chalhoub, B. (Creator), King, G. J. (Creator), Batley, J. (Creator), Edwards, D. (Creator), Zenodo, 17 Mar 2017

Dataset

Clover v2.0 reference assembly and annotation

Kaur, P. (Creator), Bayer, P. (Creator), Milec, Z. (Creator), Vrána, J. (Creator), Yuan, Y. (Creator), Appels, R. (Creator), Edwards, D. (Creator), Batley, J. (Creator), Nichols, P. G. (Creator), Erskine, W. (Creator), Doležel, J. (Creator), Zenodo, 27 Oct 2016

Dataset

Clover v3 assembly

Dudchenko, O. (Creator), Pham, M. (Creator), Lui, C. (Creator), Bayer, P. (Creator), Erskine, W. (Creator), Aiden, E. L. (Creator), Zenodo, 7 Dec 2017

Dataset