Projects per year
Personal profile
Biography
In 2015 I finished my PhD at UQ creating a novel genotyping--by-sequencing method called skimGBS. I then moved to UWA to work with the Edwards group on plant breeding using computational methods.
Roles and responsibilities
I'm a postdoctoral researcher in the group of Dave Edwards - I run my own research, help PhD students with their research,
I also run the Hacky Hour, every Friday at the Hackett Hall Cafe at 10am, where we talk code and data and help people with code and data problems: http://twitter.com/hackyhouruwa
I also am a (co-)Head of a EMBL-ABR Node
I also run the Hacky Hour, every Friday at the Hackett Hall Cafe at 10am, where we talk code and data and help people with code and data problems: http://twitter.com/hackyhouruwa
I also am a (co-)Head of a EMBL-ABR Node
Funding overview
UWA Research Collaboration Award, 'Microbe mediated alternative Nitrogen nutrition in Australian seagrasses', $29,950
Industrial relevance
Our group collaborates extensively with international breeding companies such as Bayer CropScience and Intergrain.
Research
Plant genomics, plant pangenomics, computer-assisted breeding programs, Brassica, wheat, legumes, seagrasses
Languages
English
German
French
Japanese
German
French
Japanese
Fingerprint Fingerprint is based on mining the text of the person's scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.
- 5 Similar Profiles
Genome
Medicine & Life Sciences
Brassica napus
Medicine & Life Sciences
genome
Agriculture & Biology
Genes
Medicine & Life Sciences
genes
Agriculture & Biology
Single Nucleotide Polymorphism
Medicine & Life Sciences
Gene Conversion
Medicine & Life Sciences
Brassica
Medicine & Life Sciences
Network
Recent external collaboration on country level. Dive into details by clicking on the dots.
Projects 2018 2018
- 1 Active
Microbe mediated alternative Nitrogen nutrition in Australian seagrasses
Fraser, M., Bougoure, J. & Bayer, P.
University of Western Australia
1/01/18 → 31/12/18
Project: Research
Research Output 2013 2018
Exploring the genetic and adaptive diversity of a pan-Mediterranean crop wild relative: narrow-leafed lupin
Mousavi-Derazmahalleh, M., Bayer, P. E., Nevado, B., Hurgobin, B., Filatov, D., Kilian, A., Kamphuis, L. G., Singh, K. B., Berger, J. D., Hane, J. K., Edwards, D., Erskine, W. & Nelson, M. N. Apr 2018 In : Theoretical and Applied Genetics. 131, 4, p. 887–901 15 p.Research output: Contribution to journal › Article
Open Access
Mediterranean Region
Lupinus
wild relatives
Climate Change
Genome-Wide Association Study
Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus
Alamery, S., Tirnaz, S., Bayer, P., Tollenaere, R., Chaloub, B., Edwards, D. & Batley, J. 1 Jan 2018 In : Crop and Pasture Science. 69, 1, p. 79-93 15 p.Research output: Contribution to journal › Article
Brassica napus
leucine
binding sites
nucleotides
genome
Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus
Hurgobin, B., Golicz, A. A., Bayer, P. E., Chan, C-K. K., Tirnaz, S., Dolatabadian, A., Schiessl, S. V., Samans, B., Montenegro, J. D., Parkin, I. A. P., Pires, J. C., Chalhoub, B., King, G. J., Snowdon, R., Batley, J. & Edwards, D. 10 Jan 2018 In : Plant Biotechnology Journal. p. 1-10Research output: Contribution to journal › Article
Open Access
Brassica napus
major genes
Genes
genes
Glucosinolates
A comprehensive draft genome sequence for lupin (Lupinus angustifolius), an emerging health food: insights into plant–microbe interactions and legume evolution
Hane, J. K. , Ming, Y. , Kamphuis, L. G. , Nelson, M. N. , Garg, G. , Atkins, C. A. , Bayer, P. E. , Bravo, A. , Bringans, S. D. , Cannon, S. , Edwards, D. , Foley, R. , Gao, L. L. , Harrison, M. J. , Huang, W. , Hurgobin, B. , Li, S. , Liu, C. W. , McGrath, A. , Morahan, G. & 4 others 1 Mar 2017 In : Plant Biotechnology Journal. 15, 3, p. 318-330 13 p.Research output: Contribution to journal › Article
Open Access
Lupinus
Lupinus angustifolius
health foods
Fabaceae
legumes
An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance
Kaur, P., Bayer, P. E., Milec, Z., Vrána, J., Yuan, Y., Appels, R., Edwards, D., Batley, J., Nichols, P., Erskine, W. & Doležel, J. 12 Jul 2017 In : Plant Biotechnology Journal. 15, 8, p. 1034-1046 13 p.Research output: Contribution to journal › Article
Open Access
Trifolium
Trifolium subterraneum
agronomic traits
Medicago
Genome
Datasets
philippbayer/orthomclToVenn 1.0
Bayer, P. (Creator), Zenodo, 9 Aug 2017
DOI: 10.5281/zenodo.840579, https://zenodo.org/record/840579#.WoO-jGf187w
Dataset
Repbase repeats and R-gene domains contained therein
Bayer, P. (Creator), Zenodo, 13 Feb 2018
DOI: 10.5281/zenodo.1172258 , https://zenodo.org/record/1172258#.WoPMOWf187w
Dataset
Assembly and comparison of two closely related Brassica napus genomes
Bayer, P. (Creator), Hurgobin, B. (Creator), Golicz, A. A. (Creator), Chan, C. K. (Creator), Yuan, Y. (Creator), Lee, H. (Creator), Renton, M. (Creator), Meng, J. (Creator), Li, R. (Creator), Long, Y. (Creator), Zou, J. (Creator), Bancroft, I. (Creator), Chalhoub, B. (Creator), King, G. J. (Creator), Batley, J. (Creator), Edwards, D. (Creator), Zenodo, 17 Mar 2017
DOI: 10.5281/zenodo.400371 , https://zenodo.org/record/400371#.WoOpY2f187w
Dataset
Clover v2.0 reference assembly and annotation
Kaur, P. (Creator), Bayer, P. (Creator), Milec, Z. (Creator), Vrána, J. (Creator), Yuan, Y. (Creator), Appels, R. (Creator), Edwards, D. (Creator), Batley, J. (Creator), Nichols, P. G. (Creator), Erskine, W. (Creator), Doležel, J. (Creator), Zenodo, 27 Oct 2016
DOI: 10.5281/zenodo.161479 , https://zenodo.org/record/161479#.WoOXsmf187x
Dataset
Clover v3 assembly
Dudchenko, O. (Creator), Pham, M. (Creator), Lui, C. (Creator), Bayer, P. (Creator), Erskine, W. (Creator), Aiden, E. L. (Creator), Zenodo, 7 Dec 2017
DOI: 10.5281/zenodo.1095215 , https://zenodo.org/record/1095215#.WoOodmf187w
Dataset