Mina John

Dr

  • The University of Western Australia (M309), 35 Stirling Highway,

    6009 Perth

    Australia

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  • 2022

    Adaptation to HLA-associated immune pressure over the course of HIV infection and in circulating HIV-1 strains

    Alves, E., Al-Kaabi, M., Keane, N. M., Leary, S., Almeida, C. A. M., Deshpande, P., Currenti, J., Chopra, A., Smith, R., Castley, A., Mallal, S., Kalams, S. A., Gaudieri, S. & John, M., Dec 2022, In: PLoS Pathogens. 18, 12, e1010965.

    Research output: Contribution to journalArticlepeer-review

    Open Access
  • A Novel Targeted Amplicon Next-Generation Sequencing Gene Panel for the Diagnosis of Common Variable Immunodeficiency Has a High Diagnostic Yield: Results from the Perth CVID Cohort Study

    Kermode, W., De Santis, D., Truong, L., Della Mina, E., Salman, S., Thompson, G., Nolan, D., Loh, R., Mallon, D., Mclean-Tooke, A., John, M., Tangye, S. G., O'Sullivan, M. & D'Orsogna, L. J., Jun 2022, In: The Journal of Molecular Diagnostics. 24, 6, p. 586-599 14 p.

    Research output: Contribution to journalArticlepeer-review

    2 Citations (Scopus)
  • QuantiFERON-cytomegalovirus to predict clinically significant cytomegalovirus infection after allogeneic hematopoietic stem cell transplantation

    Thompson, G., Boan, P., Purtill, D., Cooney, J., Cannell, P., Wright, M. & John, M., Apr 2022, In: Transplant Infectious Disease. 24, 2, e13786.

    Research output: Contribution to journalArticlepeer-review

    3 Citations (Scopus)
  • 2021

    Calculated globulin as a screening tool for hypogammaglobulinaemia or paraproteins in hospitalized patients

    Hoo, T., Lim, E. M., John, M., D’Orsogna, L. & McLean-Tooke, A., May 2021, In: Annals of Clinical Biochemistry. 58, 3, p. 236-243 8 p.

    Research output: Contribution to journalArticlepeer-review

    6 Citations (Scopus)
  • Cross-Reactivity to Mutated Viral Immune Targets Can Influence CD8+ T Cell Functionality: An Alternative Viral Adaptation Strategy

    Currenti, J., Law, B. M. P., Qin, K., John, M., Pilkinton, M. A., Bansal, A., Leary, S., Ram, R., Chopra, A., Gangula, R., Yue, L., Warren, C., Barnett, L., Alves, E., McDonnell, W. J., Sooda, A., Heath, S. L., Mallal, S., Goepfert, P., Kalams, S. A., & 1 othersGaudieri, S., 26 Oct 2021, In: Frontiers in Immunology. 12, 746986.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    3 Citations (Scopus)
  • Generation of a novel sars-cov-2 sub-genomic rna due to the r203k/ g204r variant in nucleocapsid: Homologous recombination has potential to change sars-cov-2 at both protein and rna level

    COVID-19 Genomics UK (COG-UK), Leary, S., Gaudieri, S., Parker, M. D., Chopra, A., James, I., Pakala, S., Alves, E., John, M., Lindsey, B. B., Keeley, A. J., Rowland-Jones, S. L., Swanson, M. S., Ostrov, D. A., Bubenik, J. L., Das, S. R., Sidney, J., Sette, A., de Silva, T. I., Phillips, E., & 1 othersMallal, S., 2021, In: Pathogens and Immunity. 6, 2, p. 27-49 23 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    22 Citations (Scopus)
  • 2019

    Autoantibodies in interstitial lung diseases

    Stevenson, B. R., Thompson, G. A., Watson, M. C., Bundell, C. S., Klinken, E. M., John, M., Lake, F. R. & McLean-Tooke, A. P., 1 Aug 2019, In: Pathology. 51, 5, p. 518-523 6 p.

    Research output: Contribution to journalArticlepeer-review

    8 Citations (Scopus)
  • Deep sequence analysis of HIV adaptation following vertical transmission reveals the 2 impact of immune pressure on the evolution of HIV

    Currenti, J., Chopra, A., John, M., Leary, S., McKinnon, B., Alves, E., Pilkinton, M. A., Smith, R., Barnett, L., McDonnell, W. J., Lucas, M., Noel, F., Mallal, S., Conrad, J. A., Kalams, S. & Gaudieri, S., 10 Dec 2019, In: PLoS Pathogens. 15, 12, e1008177.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    14 Citations (Web of Science)
  • Drug-induced alloreactivity: A new paradigm for allorecognition

    D'Orsogna, L. J., Almeida, C. A. M., van Miert, P., Zoet, Y. M., Anholts, J. D. H., Chopra, A., Watson, M., Witt, C., John, M. & Claas, F. H. J., 24 May 2019, (E-pub ahead of print) In: American Journal of Transplantation. 19, 9, p. 2606-2613 8 p.

    Research output: Contribution to journalArticlepeer-review

    1 Citation (Scopus)
  • IgE blockade in autoimmunity: Omalizumab induced remission of bullous pemphigoid

    James, T., Salman, S., Stevenson, B., Bundell, C., Kelly, G., Nolan, D. & John, M., Jan 2019, In: Clinical Immunology. 198, p. 54-56 3 p.

    Research output: Contribution to journalArticlepeer-review

    22 Citations (Scopus)
  • 2018

    Evidence of CD4+ T cell-mediated immune pressure on the Hepatitis C virus genome

    Lucas, M., Deshpande, P., James, I., Rauch, A., Pfafferott, K., Gaylard, E., Merani, S., Plauzolles, A., Lucas, A., McDonnell, W., Kalams, S., Pilkinton, M., Chastain, C., Barnett, L., Prosser, A., Mallal, S., Fitzmaurice, K., Drummer, H., Ansari, M. A., Pedergnana, V., & 5 othersBarnes, E., John, M., Kelleher, D., Klenerman, P. & Gaudieri, S., 1 Dec 2018, In: Scientific Reports. 8, 1, 7224.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    15 Citations (Scopus)
  • 2017

    Stimulation of HIV-specific T cell clonotypes using allogeneic HLA

    Almeida, C. A., van Miert, P., O'Driscoll, K., Zoet, Y. M., Chopra, A., Watson, M., de Santis, D., Witt, C., John, M., Claas, F. H. J. & D'Orsogna, L. J., Jun 2017, In: Cellular Immunology. 316, p. 32-40 9 p.

    Research output: Contribution to journalArticlepeer-review

    9 Citations (Scopus)
  • 2016

    HLA Class i and II alleles, heterozygosity and HLA-KIR interactions are associated with rates of genital HSV shedding and lesions

    Magaret, A., Dong, L., John, M., Mallal, S. A., James, I., Warren, T., Gaudieri, S., Koelle, D. M. & Wald, A., 1 Dec 2016, In: Genes and Immunity. 17, 7, p. 412-418 7 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    6 Citations (Scopus)
  • Longitudinal trends in Western Australian HIV-1 sequence diversity and viral transmission networks and their influence on clinical parameters: 2000-2014

    Castley, A. S. L., Gaudieri, S., James, I., Gizzarelli, L. S., Guelfi, G., John, M. & Nolan, D., 1 Mar 2016, In: AIDS Research and Human Retroviruses. 32, 3, p. 211-219 9 p.

    Research output: Contribution to journalArticlepeer-review

    5 Citations (Scopus)
  • 2015

    Anti-hepatitis C virus T-Cell immunity in the context of multiple exposures to the virus

    Pfafferott, K., Deshpande, P., Mckinnon, E., Merani, S., Lucas, A., Heckerman, D., Mallal, S., John, M., Gaudieri, S. & Lucas, M., 2015, In: PLoS One. 10, 6, p. e0130420

    Research output: Contribution to journalArticlepeer-review

    Open Access
    6 Citations (Web of Science)
  • 2014
    Open Access
    10 Citations (Scopus)
  • 2013

    Diagnostic dilemmas in celiac disease

    Ma, M. X., John, M. & Forbes, G., 2013, In: Expert Review of Gastroenterology and Hepatology. 7, 7, p. 643-655

    Research output: Contribution to journalArticlepeer-review

    11 Citations (Scopus)
  • 2012

    The impact of visa status and Medicare eligibility on people diagnosed with HIV in Western Australia: A qualitative report

    Herrmann, S., Wardrop, J., John, M., Gaudieri, S., Lucas, M., Mallal, S. & Nolan, D., 2012, In: Sexual Health. 9, 5, p. 407-413 7 p.

    Research output: Contribution to journalArticlepeer-review

    20 Citations (Scopus)
  • Use of alcohol, nicotine and other drugs in the Western Australian HIV Cohort study

    Herrmann, S. E., McKinnon, E. J., Williams, L. J., John, M., Mallal, S., Lucas, M. & Nolan, D. A., 9 May 2012, In: Sexual Health. 9, 2, p. 199-201 3 p.

    Research output: Contribution to journalArticlepeer-review

    5 Citations (Scopus)
  • 2011

    Constrained pattern of viral evolution in acute and early HCV infection limits viral plasticity

    Pfafferott, K., Gaudieri, S., Ulsenheimer, A., James, I., Heeg, M., Nolan, D., John, M., Rauch, A., Mallal, S., Lucas, A., Klenerman, P., Diepolder, HM. & Lucas, M., 2011, In: PLoS One. 6, 2, p. 1-8

    Research output: Contribution to journalArticlepeer-review

    Open Access
    22 Citations (Scopus)
  • Effect of Immune pressure on Hepatitis C Virus Evolution: Insights from a single-source outbreak

    Merani, S., Petrovic, D., James, I., Chopra, A., Cooper, D., Freitas, E., Rauch, R., Di Iulio, J., John, M., Lucas, M., Fitzmaurice, K., Mckiernan, S., Norris, S., Kelleher, D., Klenerman, P. & Gaudieri, S., 2011, In: Hepatology. 53, 2, p. 396-405

    Research output: Contribution to journalArticlepeer-review

    Open Access
    54 Citations (Scopus)
  • Extensive HLA-driven viral diversity following a narrow-source HIV-1 outbreak in rural China

    Dong, T., Zhang, Y., Xu, KY., Yan, HY., James, I., Peng, Y., Blais, M-E., Gaudieri, S., Chen, X., Lun, W., Wu, H., Qu, WY., Rostron, T., Li, N., Mao, Y., Mallal, S., Xu, X., Mcmichael, A., John, M. & Rowland-Jones, SL., 2011, In: Blood. 118, 1, p. 98-106

    Research output: Contribution to journalArticlepeer-review

    30 Citations (Scopus)
  • Mapping the Landscape of Host-Pathogen Coevolution: HLA Class I Binding and its Relationship with Evolutionary Conservation in Human and Viral Proteins

    Hertz, T., Nolan, D., James, I., John, M., Gaudieri, S., Phillips, E., Huang, JC., Riadi, G., Mallal, S. & Jojic, N., 2011, In: Journal of Virology. 85, 3, p. 1310-1321

    Research output: Contribution to journalArticlepeer-review

    55 Citations (Scopus)
  • 2010

    Adaptive Interactions between HLA and HIV-1: Highly Divergent Selection Imposed by HLA Class I Molecules with Common Supertype Motifs

    John, M., Heckerman, D., James, I., Park, L. P., Carlson, J. M., Chopra, A., Gaudieri, S., Nolan, D., Haas, D. W., Riddler, S. A., Haubrich, R. & Mallal, S., 2010, In: Journal of Immunology. 184, p. 4368-4377

    Research output: Contribution to journalArticlepeer-review

    38 Citations (Scopus)
  • 2009

    Divergent Adaptation of Hepatitis C Virus Genotypes 1 and 3 to Human Leukocyte Antigen-Restricted Immune Pressure

    Rauch, A., James, I., Pfafferott, K., Nolan, D., Klenerman, P., Cheng, W., Mollison, L., Mccaughan, G., Shackell, N., Jeffrey, G., Baker, R., Freitas, E., Humphreys, I., Furrer, H., Gunthard, H. F., Hirschel, B., Mallal, S., John, M., Lucas, M., Barnes, E., & 2 othersGaudieri, S. & Shackel, N., 2009, In: Hepatology. 50, 4, p. 1017-1029

    Research output: Contribution to journalArticlepeer-review

    59 Citations (Scopus)
  • 2008

    Evidence-based, multifactorial approach to addressing non-adherence to antiretroviral therapy and improving standards of care

    Herrmann, S., McKinnon, E., John, M., Hyland, N., Martinez, O. P., Cain, A., Turner, K., Coombs, A., Manolikos, C. & Mallal, S., 2008, In: Internal Medicine Journal. 38, 1, p. 8-15 8 p.

    Research output: Contribution to journalArticlepeer-review

    26 Citations (Scopus)
  • HLA-Bw4 Homozygosity Is Associated with an Impaired CD4 T Cell Recovery after Initiation of Antiretroviral Therapy

    Rauch, A., Nolan, D., Furrer, H., Mckinnon, E., John, M., Mallal, S., Gaudieri, S., Gunthard, H. F., Schmid, P., Battegay, M., Hirschel, B., Telenti, A. & James, I., 2008, In: Clinical Infectious Diseases. 46, 12, p. online - approx 5-20pp

    Research output: Contribution to journalArticlepeer-review

    26 Citations (Scopus)
  • Inferior clinical outcome of the CD4+ cell count-guided antiretroviral treatment interruption strategy in the SMART study: Role of CD4+ cell counts and HIV RNA levels during follow-up

    Lundgren, J. D., Babiker, A., El-Sadr, W., Emery, S., Grund, B., Neaton, J. D., Neuhaus, J., Phillips, A. N., Gordin, F., Finley, E., Dietz, D., Chesson, C., Vjecha, M., Standridge, B., Schmetter, B., Grue, L., Willoughby, M., Demers, A., Phillips, A., Dragsted, U. B., & 726 othersJensen, K. B., Fau, A., Borup, L., Pearson, M., Jansson, P. O., Jensen, B. G., Benfield, T. L., Darbyshire, J. H., Babiker, A. G., Palfreeman, A. J., Fleck, S. L., Collaco-Moraes, Y., Cordwell, B., Dodds, W., Van Hoff, F., Wazydrag, L., Cooper, D. A., Drummond, F. M., Connor, S. A., Satchell, C. S., Gunn, S., Oka, S., Delfino, M. A., Merlin, K., Mcginley, C., Duchene, A., Harrison, M., George, M., Hogan, C., Krum, E., Larson, G., Miller, C., Nelson, R., Roediger, M. P., Schultz, T., Thackeray, L., Prineas, R., Campbell, C., Perez, G., Lifson, A., Duprez, D., Hoy, J., Lahart, C., Perlman, D., Price, R., Rhame, F., Sampson, J., Worley, J., Rein, M., Dersimonian, R., Brody, B. A., Daar, E. S., Dubler, N. N., Fleming, T. R., Freeman, D. J., Kahn, J. P., Kim, K. M., Medoff, G., Modlin, J. F., Moellering Jr., R., Murray, B. E., Pick, B., Robb, M. L., Scharfstein, D. O., Sugarman, J., Tsiatis, A., Tuazon, C., Zoloth, L., Klingman, K., Lehrman, S., Lazovski, J., Belloso, W. H., Losso, M. H., Benetucci, J. A., Aquilia, S., Bittar, V., Bogdanowicz, E. P., Cahn, P. E., Casiro, A. D., Casetti, I., Contarelli, J. M., Corral, J. A., Crinejo, A., Daciuk, L., David, D. O., Guaragna, G., Ishida, M. T., Krolewiecki, A., Laplume, H. E., Lasala, M. B., Lourtau, L., Lupo, S. H., Maranzana, A., Masciottra, F., Michaan, M., Ruggieri, L., Salazar, E., Sanchez, M., Somenzini, C., Hoy, J. F., Rogers, G. D., Allworth, A. M., Anderson, J. S. C., Armishaw, J., Barnes, K., Carr, A., Chiam, A., Chuah, J. C. P., Curry, M. C., Dever, R. L., Donohue, W. A., Doong, N. C., Dwyer, D. E., Dyer, J., Eu, B., Ferguson, V. W., French, M., Garsia, R. J., Gold, J., Hudson, J. H., Jeganathan, S., Konecny, P., Leung, J., Mccormack, C. L., Mcmurchie, M., Medland, M., Moore, R. J., Moussa, M. B., Orth, D., Piper, M., Read, T., Roney, J. J., Roth, N., Shaw, D. R., Silvers, J., Smith, D. J., Street, A. C., Vale, R. J., Wendt, N. A., Wood, H., Youds, D. W., Zillman, J., Rieger, A., Tozeau, V., Aichelberg, A., Vetter, N., Clumeck, N., Dewit, S., De Roo, A., Kabeya, K., Leonard, P., Lynen, L., Moutschen, M., O'Doherty, E., Periera Jr., L. C., Souza, T. N. L., Schetchter, M., Zajdenverg, R., Almeida, M. M. T. B., Araujo, F., Bahia, F., Brites, C., Caseiro, M. M., Casseb, J., Etzel, A., Falco, G. G., Filho, E. C. J., Flint, S. R., Gonzales, C. R., Madruga, J. V. R., Passos, L. N., Reuter, T., Sidi, L. C., Toscano, A. L. C., Zarowny, D., Cherban, E., Cohen, J., Conway, B., Dufour, C., Ellis, M., Foster, A., Haase, D., Haldane, H., Houde, M., Kato, C., Klein, M., Lessard, B., Martel, A., Martel, C., Mcfarland, N., Paradis, E., Piche, A., Sandre, R., Schlech, W., Schmidt, S., Smaill, F., Thompson, B., Trottier, S., Vezina, S., Walmsley, S., Wolff Reyes, M. J., Northland, R., Ostergaard, L., Pedersen, C., Nielsen, H., Hergens, L., Loftheim, I. R., Raukas, M., Zilmer, K., Justinen, J., Ristola, M., Girard, P. M., Landman, R., Abel, S., Abgrall, S., Amat, K., Auperin, L., Barruet, R., Benalycherif, A., Benammar, N., Bensalem, M., Bentata, M., Besnier, J. M., Blanc, M., Bouchaud, O., Cabie, A., Chavannet, P., Chennebault, J. M., Dargere, S., De La Tribonniere, X., Debord, T., Decaux, N., Delgado, J., Dupon, M., Durant, J., Frixon-Marin, V., Genet, C., Gerard, L., Gilquin, J., Hoen, B., Jeantils, V., Kouadio, H., Leclercq, P., Lelievre, J-D., Levy, Y., Michon, C. P., Nau, P., Pacanowski, J., Peketty, C., Poizot-Martin, I., Raymond, I., Salmon, D., Schmit, J. L., Serini, M. A., Simon, A., Tassi, S., Touam, F., Verdon, R., Weinbreck, P., Weiss, L., Yazdanpanah, Y., Yeni, P., Fatkenheuer, G., Staszewski, S., Bergmann, F., Bitsch, S., Bogner, J. R., Brockmeyer, N., Esser, S., Goebel, F. D., Hartmann, M., Klinker, H., Lehmann, C., Lennemann, T., Plettenberg, A., Potthof, A., Rockstroh, J., Ross, B., Stoehr, A., Wasmuth, J. C., Wiedemeyer, K., Winzer, R., Hatzakis, A., Touloumi, G., Antoniadou, A., Daikos, G. L., Dimitrakaki, A., Gargalianos-Kakolyris, P., Giannaris, M., Karafoulidou, A., Katsambas, A., Katsarou, O., Kontos, A. N., Kordossis, T., Lazanas, M. K., Panagopoulos, P., Panos, G., Paparizos, V., Papastamopoulos, V., Petrikkos, G., Sambatakou, H., Skoutelis, A., Tsogas, N., Xylomenos, G., Bergin, C. J., Care, C. D., Dockrell, D. H., Mooka, B., Pollack, S., Mamorksy, M. G., Agmon-Levin, N., Karplus, R., Kedem, E., Maayan, S., Shahar, E., Sthoeger, Z., Turner, D., Yust, I., Tambussi, G., Rusconi, V., Abeli, C., Bechi, M., Biglino, A., Bonora, S., Butini, L., Carosi, G., Casari, S., Corpolongo, A., De Gioanni, M., Di Perri, G., Di Pietro, M., D'Offizi, G., Esposito, R., Mazzotta, F., Montroni, M., Nardini, G., Nozza, S., Quirino, T., Raise, E., Honda, M., Ishisaka, M., Caplinskas, S., Uzdaviniene, V., Schmit, J. C., Staub, T., Himmich, H., Marhoum El Filali, K., Mills, G. D., Blackmore, T., Masters, J. A., Morgan, J., Pithie, A., Brunn, J., Ormassen, V., La Rosa, A., Guerra, O., Espichan, M., Gutierrez, L., Mendo, F., Salazar, R., Knytz, B., Horban, A., Bakowska, E., Beniowski, M., Gasiorowski, J., Kwiatkowski, J., Antunes, F., Castro, R. S., Doroana, M., Horta, A., Mansinho, K., Miranda, A. C., Pinto, I. V., Valadas, E., Vera, J., Rakhmanova, A., Vinogradova, E., Yakovlev, A., Zakharova, N., Wood, R., Orrel, C., Gatell, J., Arnaiz, J. A., Carrillo, R., Clotet, B., Dalmau, D., Gonzalez, A., Jordano, Q., Jou, A., Knobel, H., Larrousse, M., Mata, R., Moreno, J. S., Oretaga, E., Pena, J. N., Pulido, F., Rubio, R., Sanz, J., Viciana, P., Hirschel, B., Spycher, R., Battegay, M., Bernasconi, E., Bottone, S., Cavassini, M., Christen, A., Franc, C., Furrer, H. J., Gayet-Ageron, A., Genne, D., Hochstrasser, S., Magenta, L., Moens, C., Muller, N., Phanuphak, P., Ruxrungtham, K., Pumpradit, W., Chetchotisakd, P., Dangthongdee, S., Kiertiburanakul, S., Klinbuayaem, V., Mootsikapun, P., Nonenoy, S., Piyavong, B., Prasithsirikul, W., Raksakulkarn, P., Gazzard, B. G., Ainsworth, J. G., Anderson, J., Angus, B. J., Barber, T. J., Brook, M. G., Chadwick, D. R., Chikohora, M., Churchill, D. R., Cornforth, D., Easterbrook, P. J., Fox, P. A., Fox, R., Gomez, P. A., Gompels, M. M., Harris, G. M., Herman, S., Jackson, A. G. A., Jebakumar, S. P. R., Johnson, M. A., Kinghorn, G. R., Kuldanek, K. A., Larbalestier, N., Leen, C., Lumsden, M., Maher, T., Mantell, J., Maw, R., Mckernan, S., Mclean, L., Morris, S., Muromba, L., Orkin, C. M., Peters, B. S., Peto, T. E. A., Portsmouth, S. D., Rajamanoharan, S., Ronan, A., Schwenk, A., Slinn, M. A., Stroud, C. J., Thomas, R. C., Wansborough-Jones, M. H., Whiles, H. J., Williams, E., Williams, I. G., Youle, M., Abrams, D. I., Acosta, E. A., Adams, S., Adamski, A., Andrews, L., Antoniskis, D., Aragon, D. R., Arduino, R., Artz, R., Bailowitz, J., Barnett, B. J., Baroni, C., Barron, M., Baxter, J. D., Beers, D., Beilke, M., Bemenderfer, D., Bernard, A., Besch, C. L., Bessesen, M. T., Bethel, J. T., Blue, S., Blum, J. D., Boarden, S., Bolan, R. K., Borgman, J. B., Brar, I., Braxton, B. K., Bredeek, U. F., Brennan, R., Britt, D. E., Brockelman, J., Brown, S., Bruzzese, V., Bulgin-Coleman, D., Bullock, D. E., Cafaro, V., Campbell, B., Caras, S., Carroll, J., Casey, K. K., Chiang, F., Childress, G., Cindrich, R. B., Clark, C., Climo, M., Cohen, C., Coley, J., Condoluci, D. V., Contreras, R., Corser, J., Cozzolino, J., Crane, L. R., Daley, L., Dandridge, D., D'Antuono, V., Darcourt Rizo Patron, J. G., Dehovitz, J. A., Dejesus, E., Desjardin, J., Diaz-Linares, M., Dietrich, C., Dodson, P., Dolce, E., Elliott, K., Erickson, D., Estes, M., Faber, L. L., Falbo, J., Farrough, M. J., Farthing, C. F., Ferrell-Gonzalez, P., Flynn, H., Frank, C., Frank, M., Freeman, K. F., French, N., Friedland, G., Fujita, N., Gahagan, L., Genther, K., Gilson, I., Goetz, M. B., Goodwin, E., Graziano, F., Guity, C. K., Gulick, P., Gunderson, E. R., Hale, C. M., Hannah, K., Henderson, H., Hennessey, K., Henry, W. K., Higgins, D. T., Hodder, S. L., Horowitz, H. W., Howe-Pittman, M., Hubbard, J., Hudson, R., Hunter, H., Hutelmyer, C., Insignares, M. T., Jackson, L., Jenny, L., John, M., Johnson, D. L., Johnson, G., Johnson, J., Johnson, L., Kaatz, J., Kaczmarski, J., Kagan, S., Kantor, C., Kempner, T., Kieckhaus, K., Kimmel, N., Klaus, B. M., Klimas, N., Koeppe, J. R., Koirala, J., Kopka, J., Kostman, J. R., Kozal, M. J., Kumar, A., Labriola, A., Lampiris, H., Lambrecht, C., Lattanzi, K. M., Lee, J., Leggett, J., Long, C., Loquere, A., Loveless, K., Lucasti, C. J., Luskin-Hawk, R., Macveigh, M., Makohon, L. H., Mannheimer, S., Markowitz, M. P., Marks, C., Martinez, N., Martorell, C., Mcfeaters, E., Mcgee, B., Mcintyre, D. M., Mckee, J., Mcmanus, E., Melecio, L. G., Melton, D., Mercado, S., Merrifield, E., Mieras, J. A., Mogyoros, M., Moran, F. M., Murphy, K., Mushatt, D., Mutic, S., Nadeem, I., Nadler, J. P., Nahass, R., Nixon, D., O'Brien, S., Ognjan, A., O'Hearn, M., O'Keefe, K., Okhuysen, P. C., Oldfield, E., Oldson, D., Orenstein, R., Ortiz, R., Osterberger, J., Owen, W., Parpart, F., Pastore-Lange, V., Paul, S., Pavlatos, A., Pearce, D. D., Pelz, R., Peterson, S., Pierone Jr., G., Pitrak, D., Powers, S. L., Pujet, H. C., Raaum, J. W., Ravishankar, J., Reeder, J., Regevik, N., Reilly, N. A., Reyelt, C., Riddell Iv, J., Rimland, D., Robinson, M. L., Rodriguez, A. E., Rodriguez-Barradas, M. C., Rodriguez-Derouen, V., Roland, R., Rosmarin, C., Rossen, W. L., Rouff, J. R., Sampson, J. H., Sands, M., Savini, C., Schrader, S., Schulte, M. M., Scott, C., Seedhom, H., Sension, M., Sheble-Hall, A., Sheridan, A., Shuter, J., Slater, L. N., Slotten, R., Slowinski, D., Smith, M., Snap, S., States, D. M., Stewart, M., Stringer, G., Sullivan, J., Summers, K. K., Swanson, K., Sweeton, I. B., Szabo, S., Tedaldi, E. M., Telzak, E. E., Temesgen, Z., Thomas, D., Thompson, M. A., Thompson, S., Bong, C. T. H., Tobin, C., Uy, J., Vaccaro, A., Vasco, L. M., Vecino, I., Verlinghieri, G. K., Visnegarwala, F., Wade, B. H., Watson, V., Weis, S. E., Weise, J. A., Weissman, S., Wilkin, A. M., Williams, L., Witter, J. H., Wojtusic, L., Wright, T. J., Yeh, V., Young, B., Zeana, C., Zeh, J., Savio, E. & Vacarezza, M., 2008, In: Journal of Infectious Diseases. 197, p. 1145

    Research output: Contribution to journalArticlepeer-review

    179 Citations (Scopus)
  • Major clinical outcomes in antiretroviral therapy (ART)-naive participants and in those not receiving ART at baseline in the SMART Study

    Emery, S., Neuhaus, J. A., Phillips, A. N., Babiker, A., Cohen, C. J., Gatell, J. M., Girard, P-M., Grund, B., Law, M., Losso, M. H., Palfreeman, A., Wood, R., Gordin, F., Finley, E., Dietz, D., Chesson, C., Vjecha, M., Standridge, B., Schmetter, B., Grue, L., & 734 othersWilloughby, M., Demers, A., Lundgren, J. D., Phillips, A., Dragsted, U. B., Jensen, K. B., Fau, A., Borup, L., Pearson, M., Jansson, P. O., Jensen, B. G., Benfield, T. L., Darbyshire, J. H., Babiker, A. G., Palfreeman, A. J., Fleck, S. L., Collaco-Moraes, Y., Cordwell, B., Dodds, W., Van Hooff, F., Wyzydrag, L., Cooper, D. A., Drummond, F. M., Connor, S. A., Satchell, C. S., Gunn, S., Oka, S., Delfino, M. A., Merlin, K., Mcginley, C., Neaton, J. D., Bartsch, G., Duchene, A., George, M., Harrison, M., Hogan, C., Krum, E., Larson, G., Miller, C., Nelson, R., Neuhaus, J., Roediger, M. P., Schultz, T., Thackeray, L., Prineas, R., Campbell, C., Perez, G., Lifson, A., Duprez, D., Hoy, J., Lahart, C., Perlman, D., Price, R., Rhame, F., Sampson, J., Worley, J., Rein, M., Dersimonian, R., Brody, B. A., Darr, E. S., Dubler, N. N., Fleming, T. R., Freeman, D. J., Kahn, J. P., Kim, K. M., Medoff, G., Modlin, J. F., Moellering, R., Murray, B. E., Pick, B., Robb, M. L., Scharfstein, D. O., Sugarman, J., Tsiatis, A., Tuazon, C., Zoloth, L., Klingman, K., Lehrman, S., Lazovski, J., Belloso, W. H., Benetucci, J. A., Aquilia, S., Bittar, V., Bogdanowicz, E. P., Cahn, P. E., Casiro, A. D., Cassetti, I., Contarelli, J. M., Corral, J. A., Crinejo, A., Daciuk, L., David, D. O., Guaragna, G., Ishida, M. T., Krolewiecki, A., Laplume, H. E., Lasala, M. B., Lourtau, L., Lupo, S. H., Maranzana, A., Masciottra, F., Michaan, M., Ruggieri, L., Salazar, E., Sanchez, M., Somenzini, C., Hoy, J. F., Rodgers, G. D., Allworth, A. M., Anderson, J. S. C., Armishaw, J., Barnes, K., Carr, A., Chiam, A., Chuah, J. C. P., Curry, M. C., Dever, R. L., Donohue, W. A., Doong, N. C., Dwyer, D. E., Dyer, J., Eu, B., Ferguson, V. W., French, M., Garsia, R. J., Gold, J., Hudson, J. H., Jeganathan, S., Konecny, P., Leung, J., Mccormack, C. L., Mcmurchie, M., Medland, N., Moore, R. J., Moussa, M. B., Orth, D., Piper, M., Read, T., Roney, J. J., Roth, N., Shaw, D. R., Silvers, J., Smith, D. J., Street, A. C., Vale, R. J., Wendt, N. A., Wood, H., Youds, D. W., Zillman, J., Rieger, A., Tozeau, V., Aichelburg, A., Vetter, N., Clumeck, N., Dewit, S., De Roo, A., Kabeya, K., Leonard, P., Lynen, L., Moutschen, M., O'Doherty, E., Pereira, L. C., Souza, T. N. L., Schechter, M., Zajdenverg, R., Almeida, M. M. T. B., Araujo, F., Bahia, F., Brites, C., Caseiro, M. M., Casseb, J., Etzel, A., Falco, G. G., Filho, E. C. J., Flint, S. R., Gonzales, C. R., Madruga, J. V. R., Passos, L. N., Reuter, T., Sidi, L. C., Toscano, A. L. C., Zarowny, D., Cherban, E., Cohen, J., Conway, B., Dufour, C., Ellis, M., Foster, A., Haase, D., Haldane, H., Houde, M., Kato, C., Klein, M., Lessard, B., Martel, A., Martel, C., Mcfarland, N., Paradis, E., Piche, A., Sandre, R., Schlech, W., Schmidt, S., Smaill, F., Thompson, B., Trottier, S., Vezina, S., Walmsley, S., Wolff Reyes, M. J., Northland, R., Ostergaard, L., Pedersen, C., Nielsen, H., Hergens, L., Loftheim, I. R., Raukas, M., Zilmer, K., Justinen, J., Ristola, M., Girard, P. M., Landman, R., Abel, S., Abgrall, S., Amat, K., Auperin, L., Barruet, R., Benalycherif, A., Benammar, N., Bensalem, M., Bentata, M., Besnier, J. M., Blanc, M., Bouchaud, O., Cabie, A., Chavannet, P., Chennebault, J. M., Dargere, S., De La Tribonniere, X., Debord, T., Decaux, N., Delgado, J., Dupon, M., Durant, J., Frixon-Marin, V., Genet, C., Gerard, L., Gilquin, J., Hoen, B., Jeantils, V., Kouadio, H., Leclercq, P., Lelievre, J. D., Levy, Y., Michon, C. P., Nau, P., Pacanowski, J., Piketty, C., Poizot-Martin, I., Raymond, I., Salmon, D., Schmit, J. L., Serini, M. A., Simon, A., Tassi, S., Touam, F., Verdon, R., Weinbreck, P., Weiss, L., Yazdanpanah, Y., Yeni, P., Fatkenheuer, G., Staszewski, S., Bergmann, F., Bitsch, S., Bogner, J. R., Brockmeyer, N., Esser, S., Goebel, F. D., Hartmann, M., Klinker, H., Lehmann, C., Lennemann, T., Plettenberg, A., Potthof, A., Rockstroh, J., Ross, B., Stoehr, A., Wasmuth, J. C., Wiedemeyer, K., Winzer, R., Hatzakis, A., Touloumi, G., Antoniadou, A., Daikos, G. L., Dimitrakaki, A., Gargalianos-Kakolyris, P., Giannaris, M., Karafoulidou, A., Katsambas, A., Katsarou, O., Kontos, A. N., Kordossis, T., Lazanas, M. K., Panagopoulos, P., Panos, G., Paparizos, V., Papastamopoulos, V., Petrikkos, G., Sambatakou, H., Skoutelis, A., Tsogas, N., Xylomenos, G., Bergin, C. J., Mooka, B., Pollack, S., Mamorksy, M. G., Agmon-Levin, N., Karplus, R., Kedem, E., Maayan, S., Shahar, E., Sthoeger, Z., Turner, D., Yust, I., Tambussi, G., Rusconi, V., Abeli, C., Bechi, M., Biglino, A., Bonora, S., Butini, L., Carosi, G., Casari, S., Corpolongo, A., De Gioanni, M., Di Perri, G., Di Pietro, M., D'Offizi, G., Esposito, R., Mazzotta, F., Montroni, M., Nardini, G., Nozza, S., Quirino, T., Raise, E., Honda, M., Ishisaka, M., Caplinskas, S., Uzdaviniene, V., Schmit, J. C., Staub, T., Himmich, H., Marhoum El Filali, K., Mills, G. D., Blackmore, T., Masters, J. A., Morgan, J., Pithie, A., Brunn, J., Ormassen, V., La Rosa, A., Guerra, O., Espichan, M., Gutierrez, L., Mendo, F., Salazar, R., Knytz, B., Horban, A., Bakowska, E., Beniowski, M., Gasiorowski, J., Kwiatkowski, J., Antunes, F., Castro, R. S., Doroana, M., Horta, A., Mansinho, K., Miranda, A. C., Pinto, I. V., Valadas, E., Vera, J., Rakhmanova, A., Vinogradova, E., Yakovlev, A., Zakharova, N., Orrel, C., Gatell, J., Arnaiz, J. A., Carrillo, R., Clotet, B., Dalmau, D., Gonzalez, A., Jordano, Q., Jou, A., Knobel, H., Larrousse, M., Mata, R., Moreno, J. S., Oretaga, E., Pena, J. N., Pulido, F., Rubio, R., Sanz, J., Viciana, P., Hirschel, B., Spycher, R., Battegay, M., Bernasconi, E., Bottone, S., Cavassini, M., Christen, A., Franc, C., Furrer, H. J., Gayet-Ageron, A., Genne, D., Hochstrasser, S., Magenta, L., Moens, C., Muller, N., Nuesch, R., Phanuphak, P., Ruxrungtham, K., Pumpradit, W., Chetchotisakd, P., Dangthongdee, S., Kiertiburanakul, S., Klinbuayaem, V., Mootsikapun, P., Nonenoy, S., Piyavong, B., Prasithsirikul, W., Raksakulkarn, P., Gazzard, B. G., Ainsworth, J. G., Anderson, J., Angus, B. J., Barber, T. J., Brook, M. G., Care, C. D., Chadwick, D. R., Chikohora, M., Churchill, D. R., Cornforth, D., Dockrell, D. H., Easterbrook, P. J., Fox, P. A., Fox, R., Gomez, P. A., Gompels, M. M., Harris, G. M., Herman, S., Jackson, A. G. A., Jebakumar, S. P. R., Johnson, M. A., Kinghorn, G. R., Kuldanek, K. A., Larbalestier, N., Leen, C., Lumsden, M., Maher, T., Mantell, J., Maw, R., Mckernan, S., Mclean, L., Morris, S., Muromba, L., Orkin, C. M., Peters, B. S., Peto, T. E. A., Portsmouth, S. D., Rajamanoharan, S., Ronan, A., Schwenk, A., Slinn, M. A., Stroud, C. J., Thomas, R. C., Wansbrough-Jones, M. H., Whiles, H. J., White, D. J., Williams, E., Williams, I. G., Youle, M., Abrams, D. I., Acosta, E. A., Adams, S., Adamski, A., Andrews, L., Antoniskis, D., Aragon, D. R., Arduino, R., Artz, R., Bailowitz, J., Barnett, B. J., Baroni, C., Barron, M., Baxter, J. D., Beers, D., Beilke, M., Bemenderfer, D., Bernard, A., Besch, C. L., Bessesen, M. T., Bethel, J. T., Blue, S., Blum, J. D., Boarden, S., Bolan, R. K., Borgman, J. B., Brar, I., Braxton, B. K., Bredeek, U. F., Brennan, R., Britt, D. E., Brockelman, J., Brown, S., Bruzzese, V., Bulgin-Coleman, D., Bullock, D. E., Cafaro, V., Campbell, B., Caras, S., Carroll, J., Casey, K. K., Chiang, F., Childress, G., Cindrich, R. B., Clark, C., Climo, M., Cohen, C., Coley, J., Condoluci, D. V., Contreras, R., Corser, J., Cozzolino, J., Crane, L. R., Daley, L., Dandridge, D., D'Antuono, V., Darcourt Rizo Patron, J. G., Dehovitz, J. A., Dejesus, E., Desjardin, J., Diaz-Linares, M., Dietrich, C., Dodson, P., Dolce, E., Elliott, K., Erickson, D., Estes, M., Faber, L. L., Falbo, J., Farrough, M. J., Farthing, C. F., Ferrell-Gonzalez, P., Flynn, H., Frank, C., Frank, M., Freeman, K. F., French, N., Friedland, G., Fujita, N., Gahagan, L., Genther, K., Gilson, I., Goetz, M. B., Goodwin, E., Graziano, F., Guity, C. K., Gulick, P., Gunderson, E. R., Hale, C. M., Hannah, K., Henderson, H., Hennessey, K., Henry, W. K., Higgins, D. T., Hodder, S. L., Horowitz, H. W., Howe-Pittman, M., Hubbard, J., Hudson, R., Hunter, H., Hutelmyer, C., Insignares, M. T., Jackson, L., Jenny, L., John, M., Johnson, D. L., Johnson, G., Johnson, J., Johnson, L., Kaatz, J., Kaczmarski, J., Kagan, S., Kantor, C., Kempner, T., Kieckhaus, K., Kimmel, N., Klaus, B. M., Klimas, N., Koeppe, J. R., Koirala, J., Kopka, J., Kostman, J. R., Kozal, M. J., Kumar, A., Labriola, A., Lampiris, H., Lamprecht, C., Lattanzi, K. M., Lee, J., Leggett, J., Long, C., Loquere, A., Loveless, K., Lucasti, C. J., Luskin-Hawk, R., Macveigh, M., Makohon, L. H., Mannheimer, S., Markowitz, N. P., Marks, C., Martinez, N., Martorell, C., Mcfeaters, E., Mcgee, B., Mcintyre, D. M., Mckee, J., Mcmanus, E., Melecio, L. G., Melton, D., Mercado, S., Merrifield, E., Mieras, J. A., Mogyoros, M., Moran, F. M., Murphy, K., Mushatt, D., Mutic, S., Nadeem, I., Nadler, J. P., Nahass, R., Nixon, D., O'Brien, S., Ognjan, A., O'Hearn, M., O'Keefe, K., Okhuysen, P. C., Oldfield, E., Olson, D., Orenstein, R., Ortiz, R., Osterberger, J., Owen, W., Parpart, F., Pastore-Lange, V., Paul, S., Pavlatos, A., Pearce, D. D., Pelz, R., Peterson, S., Pierone, G., Pitrak, D., Powers, S. L., Pujet, H. C., Raaum, J. W., Ravishankar, J., Reeder, J., Regevik, N., Reilly, N. A., Reyelt, C., Riddell, J., Rimland, D., Robinson, M. L., Rodriguez, A. E., Rodriguez-Barradas, M. C., Rodriguez Derouen, V., Roland, R., Rosmarin, C., Rossen, W. L., Rouff, J. R., Sampson, J. H., Sands, M., Savini, C., Schrader, S., Schulte, M. M., Scott, C., Seedhom, H., Sension, M., Sheble-Hall, A., Sheridan, A., Shuter, J., Slater, L. N., Slotten, R., Slowinski, D., Smith, M., Snap, S., States, D. M., Stewart, M., Stringer, G., Sullivan, J., Summers, K. K., Swanson, K., Sweeton, I. B., Szabo, S., Tedaldi, E. M., Telzak, E. E., Temesgen, Z., Thomas, D., Thompson, M. A., Thompson, S., Ting Hong Bong, C., Tobin, C., Uy, J., Vaccaro, A., Vasco, L. M., Vecino, I., Verlinghieri, G. K., Visnegarwala, F., Wade, B. H., Watson, V., Weis, S. E., Weise, J. A., Weissman, S., Wilkin, A. M., Williams, L., Witter, J. H., Wojtusic, L., Wright, T. J., Yeh, V., Young, B., Zeana, C., Zeh, J., Savio, E. & Vacarezza, M., 2008, In: Journal of Infectious Diseases. 197, 8, p. 1133-1143

    Research output: Contribution to journalArticlepeer-review

    346 Citations (Scopus)
  • 2007

    Skewed association of polyfunctional antigen-specific CD8 T cell populations with HLA-B genotype

    Harari, A., Cellerai, C., Enders, F. B., Kostler, J., Codarri, L., Tapia, G., Boyman, O., Castro, E., Gaudieri, S., James, I., John, M., Wagner, R., Mallal, S. & Pantaleo, G., 2007, In: Proceedings of the National Academy of Sciences of the United States of America. 104, 41, p. 16233-16238

    Research output: Contribution to journalArticlepeer-review

    113 Citations (Scopus)
  • 2003
    55 Citations (Scopus)
  • Randomized, controlled, 48-week study of switching stavudine and/or protease inhibitors to combivir/abacavir to prevent or reverse lipoatrophy in HIV-infected patients

    John, M., McKinnon, E. J., James, I. R., Nolan, D. A., Herrmann, S. E., Moore, C. B., White, A. J. & Mallal, S. A., 2003, In: Journal of Acquired Immune Deficiency Syndromes. 33, 1, p. 29-33 5 p.

    Research output: Contribution to journalArticlepeer-review

    119 Citations (Scopus)
  • 2002

    Evidence of HIV-1 Adaptation to HLA-Restricted Immune Responses at a Population Level

    Moore, C. B., John, M., James, I. R., Christiansen, F., Witt, C. S. & Mallal, S. A., 2002, In: Science. 296, 24 May, p. 1439-1443

    Research output: Contribution to journalArticlepeer-review

    650 Citations (Scopus)
  • 2001

    Stable or increasing bone mineral density in HIV-infected patients treated with nelfinavir or indinavir

    Nolan, D., Upton, R., Mckinnon, E., John, M., James, I., Adler, B., Roff, G., Vasikaran, S. & Mallal, S., 2001, In: AIDS. 15, p. 1275-1280

    Research output: Contribution to journalArticlepeer-review

    155 Citations (Scopus)
  • 2000

    Assessment of Immune Function by Lymphoproliferation Underestimates Lymphocyte Functional Capacity in HIV Patients Treated with Highly Active Antiretroviral Therapy

    Keane, N. M., Price, P., Stone, S., John, M., Murray, R. J. & French, M. A., 2000, In: AIDS Research and Human Retroviruses. 16, 18, p. 1991-1996

    Research output: Contribution to journalArticlepeer-review

    33 Citations (Scopus)
  • Immune-restoration disease after the treatment of immunodeficient HIV-infected patients with highly active antiretroviral therapy

    French, M. A., Lenzo, N., John, M., Mallal, S. A., Mckinnon, E. J., James, I. R., Price, P., Flexman, J. P. & Tay-Kearney, M-L., 2000, In: HIV Medicine. 1, 2, p. 107-115

    Research output: Contribution to journalArticlepeer-review

    372 Citations (Scopus)