James Whelan

Winthrop Professor

  • The University of Western Australia (M470), 35 Stirling Highway,

    6009 Perth

    Australia

  • 14000 Citations
  • 63 h-Index
19932018
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Projects 1996 2018

Research Output 1993 2018

A family of small, cyclic peptides buried in preproalbumin since the Eocene epoch

Fisher, M. F., Zhang, J., Taylor, N. L., Howard, M. J., Berkowitz, O., Debowski, A. W., Behsaz, B., Whelan, J., Pevzner, P. A. & Mylne, J. S., Feb 2018, In : Plant Direct. 2, 2, e00042.

Research output: Contribution to journalArticle

Open Access
Cyclic Peptides
Peptides
asparaginylendopeptidase
Transcriptome
Albumins

The phosphate fast-responsive genes PECP1 and PPsPase1 affect phosphocholine and phosphoethanolamine content

Hanchi, M., Thibaud, M. C., Légeret, B., Kuwata, K., Pochon, N., Beisson, F., Cao, A., Cuyas, L., David, P., Doerner, P., Ferjani, A., Lai, F., Li-Beisson, Y., Mutterer, J., Philibert, M., Raghothama, K. G., Rivasseau, C., Secco, D., Whelan, J., Nussaume, L. & 1 othersJavot, H., 1 Apr 2018, In : Plant Physiology. 176, 4, p. 2943-2962 20 p.

Research output: Contribution to journalArticle

Open Access
Phosphorylcholine
Phosphates
phosphates
Starvation
starvation
6 Citations

A multi-step peptidolytic cascade for amino acid recovery in chloroplasts

Teixeira, P. F., Kmiec, B., Branca, R. M. M., Murcha, M. W., Byzia, A., Ivanova, A., Whelan, J., Drag, M., Lehtiö, J. & Glaser, E., 1 Jan 2017, In : Nature Chemical Biology. 13, 1, p. 15-17 3 p.

Research output: Contribution to journalArticle

Chloroplasts
Amino Acids
Aminopeptidases
Plastids
Arabidopsis
15 Citations

Community recommendations on terminology and procedures used in flooding and low oxygen stress research

Sasidharan, R., Bailey-Serres, J., Ashikari, M., Atwell, B. J., Colmer, T. D., Fagerstedt, K., Fukao, T., Geigenberger, P., Hebelstrup, K. H., Hill, R. D., Holdsworth, M. J., Ismail, A. M., Licausi, F., Mustroph, A., Nakazono, M., Pedersen, O., Perata, P., Sauter, M., Shih, M. C., Sorrell, B. K. & 6 othersStriker, G. G., van Dongen, J. T., Whelan, J., Xiao, S., Visser, E. J. W. & Voesenek, L. A. C. J., 9 Mar 2017, In : New Phytologist. 214, 4, p. 1403–1407

Research output: Contribution to journalArticle

7 Citations

Dynamic and rapid changes in the transcriptome and epigenome during germination and in developing rice (Oryza sativa) coleoptiles under anoxia and re-oxygenation

Narsai, R., Secco, D., Schultz, M. D., Ecker, J. R., Lister, R. & Whelan, J., 1 Feb 2017, In : The Plant Journal. 89, 4, p. 805-824 20 p.

Research output: Contribution to journalArticle

Cotyledon
coleoptiles
DNA methylation
DNA Methylation
Germination

Datasets

Data from: Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements

Secco, D. (Creator), Wang, C. (Creator), Shou, H. (Creator), Schultz, M. D. (Creator), Chiarenza, S. (Creator), Nussaume, L. (Creator), Ecker, J. R. (Creator), Whelan, J. (Creator), Lister, R. (Creator), Dryad Digital Repository, 6 Aug 2015

Dataset

Data from: Spatio-temporal transcript profiling of rice roots and shoots in response to phosphate starvation and recovery

Secco, D. (Creator), Jabnoune, M. (Creator), Walker, H. (Creator), Shou, H. (Creator), Wu, P. (Creator), Poirier, Y. (Creator), Whelan, J. (Creator), Dryad Digital Repository, 19 Nov 2013

Dataset