Jacqueline Batley

Professor

  • The University of Western Australia (M084), 35 Stirling Highway,

    6009 Crawley

    Australia

  • 5895 Citations
  • 35 h-Index
19982018
If you made any changes in Pure these will be visible here soon.

Research Output 1998 2018

2018

Agricultural selection and presence-absence variation in spring-type canola germplasm

Mason, A. S., Chauhan, P., Banga, S., Banga, S. S., Salisbury, P., Barbetti, M. J. & Batley, J. 1 Jan 2018 Crop & Pasture Science: 2016 International Brassica Conference. Van de Wouw, A. & Batley, J. (eds.). 1 ed. Australia: CSIRO Publishing, Vol. 69, p. 55-64 10 p. (Crop and Pasture Science)

Research output: Chapter in Book/Report/Conference proceedingConference paper

Open Access
File
canola
Brassica napus
germplasm
genome
chromosomes

Brassica 2016 Phenomics to genomics and everything in between

Van De Wouw, A. & Batley, J. 1 Jan 2018 In : Crop and Pasture Science. 69, 1, p. i

Research output: Contribution to journalEditorial

1 Citations

Genome-wide identification and comparative analysis of NBS-LRR resistance genes in Brassica napus

Alamery, S., Tirnaz, S., Bayer, P., Tollenaere, R., Chaloub, B., Edwards, D. & Batley, J. 1 Jan 2018 In : Crop and Pasture Science. 69, 1, p. 79-93 15 p.

Research output: Contribution to journalArticle

Brassica napus
leucine
binding sites
nucleotides
genome
1 Citations

Homoeologous exchange is a major cause of gene presence/absence variation in the amphidiploid Brassica napus

Hurgobin, B., Golicz, A. A., Bayer, P. E., Chan, C-K. K., Tirnaz, S., Dolatabadian, A., Schiessl, S. V., Samans, B., Montenegro, J. D., Parkin, I. A. P., Pires, J. C., Chalhoub, B., King, G. J., Snowdon, R., Batley, J. & Edwards, D. 10 Jan 2018 In : Plant Biotechnology Journal. p. 1-10

Research output: Contribution to journalArticle

Open Access
Brassica napus
major genes
Genes
genes
Glucosinolates
1 Citations
Open Access
marker-assisted selection
drought tolerance
single nucleotide polymorphism
chromosome mapping
genome
2 Citations

Investigation of the diversity of effector genes in the banana pathogen, Fusarium oxysporum f. sp. cubense, reveals evidence of horizontal gene transfer

Czislowski, E., Fraser-Smith, S., Zander, M., O'Neill, W. T., Meldrum, R. A., Tran-Nguyen, L. T. T., Batley, J. & Aitken, E. A. B. 1 May 2018 In : Molecular Plant Pathology. 19, 5, p. 1155-1171 17 p.

Research output: Contribution to journalArticle

Fusarium oxysporum f. sp. cubense
Xylem
Horizontal Gene Transfer
Musa
gene transfer
10 Citations

Speed breeding is a powerful tool to accelerate crop research and breeding

Watson, A. , Ghosh, S. , Williams, M. J. , Cuddy, W. S. , Simmonds, J. , Rey, M. D. , Asyraf Md Hatta, M. , Hinchliffe, A. , Steed, A. , Reynolds, D. , Adamski, N. M. , Breakspear, A. , Korolev, A. , Rayner, T. , Dixon, L. E. , Riaz, A. , Martin, W. , Ryan, M. , Edwards, D. , Batley, J. & 15 others Raman, H., Carter, J., Rogers, C., Domoney, C., Moore, G., Harwood, W., Nicholson, P., Dieters, M. J., Delacy, I. H., Zhou, J., Uauy, C., Boden, S. A., Park, R. F., Wulff, B. B. H. & Hickey, L. T. 1 Jan 2018 In : Nature Plants. 4, 1, p. 23-29 7 p.

Research output: Contribution to journalArticle

breeding
crops
lighting
greenhouses
cost effectiveness
2017
4 Citations

An advanced reference genome of Trifolium subterraneum L. reveals genes related to agronomic performance

Kaur, P., Bayer, P. E., Milec, Z., Vrána, J., Yuan, Y., Appels, R., Edwards, D., Batley, J., Nichols, P., Erskine, W. & Doležel, J. 12 Jul 2017 In : Plant Biotechnology Journal. 15, 8, p. 1034-1046 13 p.

Research output: Contribution to journalArticle

Open Access
Trifolium
Trifolium subterraneum
agronomic traits
Medicago
Genome
5 Citations

Assembly and comparison of two closely related Brassica napus genomes

Bayer, P. E., Hurgobin, B., Golicz, A. A., Chan, C-K. K., Yuan, Y., Lee, H., Renton, M., Meng, J., Li, R., Long, Y., Zou, J., Bancroft, I., Chalhoub, B., King, G. J., Batley, J. & Edwards, D. 14 Jun 2017 In : Plant Biotechnology Journal. 15, 12, p. 1-9 9 p.

Research output: Contribution to journalArticle

Open Access
Brassica napus
Genome
genome
Genes
genes
10 Citations

A user guide to the Brassica60K Illumina Infinium™ SNP genotyping array

Mason, A. S., Higgins, E. E., Snowdon, R. J., Batley, J., Stein, A., Werner, C. & Parkin, I. A. P. Apr 2017 In : Theoretical and Applied Genetics. 130, 4, p. 621–633 13 p.

Research output: Contribution to journalReview article

genotyping
Single Nucleotide Polymorphism
Brassica
Brassica napus
loci

Copy number variation and disease resistance in plants

Dolatabadian, A., Patel, D. A., Edwards, D. & Batley, J. Dec 2017 In : Theoretical and Applied Genetics. 130, 12, p. 2479-2490 12 p.

Research output: Contribution to journalArticle

Open Access
File
Disease Resistance
disease resistance
Plant Dispersal
Plant Genome
Plant Diseases

Current status and challenges in identifying disease resistance genes in Brassica napus

Neik, T. X., Barbetti, M. & Batley, J. 6 Nov 2017 In : Frontiers in Plant Science. 8, p. 1-37 1788

Research output: Contribution to journalArticle

Open Access
File
Brassica napus
disease resistance
pathogens
genes
cole crops
2 Citations

Cytogenetic and molecular characterization of B-genome introgression lines of Brassica napus L.

Dhaliwal, I., Mason, A. S., Banga, S., Bharti, S., Kaur, B., Gurung, A. M., Salisbury, P. A., Batley, J. & Banga, S. S. Jan 2017 In : G3: Genes, Genomes, Genetics. 7, 1, p. 77-86 10 p.

Research output: Contribution to journalArticle

Open Access
Brassica napus
Cytogenetics
Chromosomes
Genome
Single Nucleotide Polymorphism
5 Citations

Genome analysis identified novel candidate genes for ascochyta blight resistance in chickpea using whole genome re-sequencing data

Li, Y., Ruperao, P., Batley, J., Edwards, D., Davidson, J., Hobson, K. & Sutton, T. 17 Mar 2017 In : Frontiers in Plant Science. 8, 359

Research output: Contribution to journalArticle

Open Access
Ascochyta
blight
single nucleotide polymorphism
genome
phosphotransferases (kinases)
4 Citations

Genome-wide association study of genetic control of seed fatty acid biosynthesis in Brassica napus

Gacek, K., Bayer, P. E., Bartkowiak-Broda, I., Szala, L., Bocianowski, J., Edwards, D. & Batley, J. 20 Jan 2017 In : Frontiers in Plant Science. 7, 2062

Research output: Contribution to journalArticle

Open Access
Brassica napus
biosynthesis
fatty acids
seeds
stearoyl-CoA desaturase
2 Citations

Genoproteomics-assisted improvement of Andrographis paniculata: toward a promising molecular and conventional breeding platform for autogamous plants affecting the pharmaceutical industry

Valdiani, A., Talei, D., Lattoo, S. K., Ortiz, R., Rasmussen, S. K., Batley, J., Rafii, M. Y., Maziah, M., Sabu, K. K., Abiri, R., Sakuanrungsirikul, S. & Tan, S. G. 3 Jan 2017 In : Critical Reviews in Biotechnology. 37, 6, p. 803-816 14 p.

Research output: Contribution to journalArticle

Andrographis
DNA Shuffling
Drug Industry
Breeding
Clustered Regularly Interspaced Short Palindromic Repeats
20 Citations

Genotyping-by-sequencing approaches to characterize crop genomes: choosing the right tool for the right application

Scheben, A., Batley, J. & Edwards, D. 1 Feb 2017 In : Plant Biotechnology Journal. 15, 2, p. 149-161 13 p.

Research output: Contribution to journalReview article

Open Access
File
genotyping
Genome
Costs and Cost Analysis
genome
crops
8 Citations

Improvements in Genomic Technologies: Application to Crop Genomics

Yuan, Y., Bayer, P. E., Batley, J. & Edwards, D. Jun 2017 In : TRENDS IN BIOTECHNOLOGY. 35, 6, p. 547-558

Research output: Contribution to journalReview article

Genomics
Crops
Genes
Genome
Technology
1 Citations

Neodiversification of homeologous CLAVATA1-like receptor kinase genes in soybean leads to distinct developmental outcomes

Mirzaei, S., Batley, J., El-Mellouki, T., Liu, S., Meksem, K., Ferguson, B. J. & Gresshoff, P. M. 1 Dec 2017 In : Scientific Reports. 7, 1, 8878

Research output: Contribution to journalArticle

Open Access
Soybeans
Phosphotransferases
Phenotype
Symbiosis
Meristem
4 Citations

RNA-Seq and metabolic flux analysis of Tetraselmis sp. M8 during nitrogen starvation reveals a two-stage lipid accumulation mechanism

Lim, D. K. Y., Schuhmann, H., Thomas-Hall, S. R., Chan, K. C. K., Wass, T. J., Aguilera, F., Adarme-Vega, T. C., Dal'Molin, C. G. O., Thorpe, G. J., Batley, J., Edwards, D. & Schenk, P. M. 1 Nov 2017 In : Bioresource Technology. 244, Part 2, p. 1281-1293 13 p.

Research output: Contribution to journalArticle

RNA
starvation
Lipids
Nitrogen
lipid

Segregation for fertility and meiotic stability in novel Brassica allohexaploids

Mwathi, M. W., Gupta, M., Atri, C., Banga, S. S., Batley, J. & Mason, A. S. 1 Apr 2017 In : Theoretical and Applied Genetics. 130, 4, p. 767-778

Research output: Contribution to journalArticle

Brassica
Fertility
Population
Pollen
varespladib methyl
4 Citations

The loss of vernalization requirement in narrow-leafed lupin is associated with a deletion in the promoter and de-repressed expression of a Flowering Locus T (FT) homologue

Nelson, M. N., Ksiazkiewicz, M., Rychel, S., Besharat, N., Taylor, C. M., Wyrwa, K., Jost, R., Erskine, W., Cowling, W. A., Berger, J. D., Batley, J., Weller, J. L., Naganowska, B. & Wolko, B. 1 Jan 2017 In : New Phytologist. 213, 1, p. 220-232 13 p.

Research output: Contribution to journalArticle

Lupinus
vernalization
promoter regions
flowering
Mutation
16 Citations

The pangenome of hexaploid bread wheat

Montenegro, J. D., Golicz, A. A., Bayer, P. E., Hurgobin, B., Lee, H., Chan, C. K. K., Visendi, P., Lai, K., Doležel, J., Batley, J. & Edwards, D. Jun 2017 In : The Plant Journal. 90, 5, p. 1007-1013

Research output: Contribution to journalArticle

Bread
hexaploidy
Triticum
wheat
Genes
11 Citations

Towards CRISPR/Cas crops - bringing together genomics and genome editing

Scheben, A., Wolter, F., Batley, J., Puchta, H. & Edwards, D. Nov 2017 In : New Phytologist. 216, 3, p. 682-698 17 p.

Research output: Contribution to journalReview article

2016
30 Citations

A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome

Clarke, W. E. , Higgins, E. E. , Plieske, J. , Wieseke, R. , Sidebottom, C. , Khedikar, Y. , Batley, J. , Edwards, D. , Meng, J. , Li, R. , Lawley, C. T. , Pauquet, J. , Laga, B. , Cheung, W. , Iniguez-Luy, F. , Dyrszka, E. , Rae, S. , Stich, B. , Snowdon, R. J. , Sharpe, A. G. & 2 others Ganal, M. W. & Parkin, I. A. P. 2016 In : Theoretical and Applied Genetics. 129, 10, p. 1887-1899

Research output: Contribution to journalArticle

Open Access
Brassica napus
Diploidy
genotyping
single nucleotide polymorphism
Single Nucleotide Polymorphism
2 Citations

An efficient approach to BAC based assembly of complex genomes

Visendi, P., Berkman, P. J., Hayashi, S., Golicz, A. A., Bayer, P., Ruperao, P., Hurgobin, B., Montenegro, J., Chan, K., Staňková, H., Batley, J., Šimková, H., Doležel, J. & Edwards, D. 20 Jan 2016 In : Plant Methods. 12, 1, p. 1

Research output: Contribution to journalArticle

Open Access
Bacterial Artificial Chromosomes
bacterial artificial chromosomes
Genome
genome
sequence analysis
5 Citations

Can genomics assist the phenological adaptation of canola to new and changing environments?

Nelson, M. N., Lilley, J. M., Helliwell, C., Taylor, C. M., Siddique, K. H. M., Chen, S., Raman, H., Batley, J. & Cowling, W. A. 29 Mar 2016 In : Crop and Pasture Science. 67, 3-4, p. 284-297 14 p.

Research output: Contribution to journalReview article

canola
flowering
genomics
Brassica napus
phenology
11 Citations

Centromere Locations in Brassica A and C Genomes Revealed Through Half-Tetrad Analysis

Mason, A. S., Rousseau-Gueutin, M., Morice, J., Bayer, P., Besharat, N., Cousin, A., Pradhan, A., Parkin, I. A., Chevre, A. M., Batley, J. & Nelson, M. Feb 2016 In : Genetics. 202, 2, p. 513-523

Research output: Contribution to journalArticle

Open Access
Centromere
Brassica
Genome
Brassica napus
Chromatids

Genome-wide association analyses provide genomic insights into natural variation in heat tolerance of Brassica rapa

Chen, S., Hayward, A., Witt Hmon, K. P., Dey, S. S., Inturrisi, F. C., Dolatabadian, A., Neik, T. X., Yang, H., Nelson, M., Turner, N., Siddique, K., Cowling, W. & Batley, J. 2016

Research output: Contribution to conferenceAbstract

7 Citations

Genome-wide association study identifies new loci for resistance to leptosphaeria maculans in canola

Raman, H., Raman, R., Coombes, N., Song, J., Diffey, S., Kilian, A., Lindbeck, K., Barbulescu, D. M., Batley, J., Edwards, D., Salisbury, P. A. & Marcroft, S. 24 Oct 2016 In : Frontiers in Plant Science. 7, OCTOBER, 1513

Research output: Contribution to journalArticle

Open Access
Plenodomus lingam
canola
loci
Brassica napus
mature plants
6 Citations

Germin-like protein 2 gene promoter from rice is responsive to fungal pathogens in transgenic potato plants

Munir, F., Hayashi, S., Batley, J., Naqvi, S. M. S. & Mahmood, T. 2016 In : Functional & Integrative Genomics. 16, 1, p. 19-27

Research output: Contribution to journalArticle

27 Citations

Global agricultural intensification during climate change: a role for genomics

Abberton, M. , Batley, J. , Bentley, A. , Bryant, J. , Cai, H. , Cockram, J. , Costa De Oliveira, A. , Cseke, L. J. , Dempewolf, H. , De Pace, C. , Edwards, D. , Gepts, P. , Greenland, A. , Hall, A. E. , Henry, R. , Hori, K. , Howe, G. T. , Hughes, S. , Humphreys, M. , Lightfoot, D. & 10 others Marshall, A., Mayes, S., Nguyen, H. T., Ogbonnaya, F. C., Ortiz, R., Paterson, A. H., Tuberosa, R., Valliyodan, B., Varshney, R. & Yano, M. Apr 2016 In : Plant Biotechnology Journal. 14, 4, p. 1095–1098

Research output: Contribution to journalReview article

Open Access
Climate Change
Genomics
Agriculture
Breeding
specialty crops
5 Citations

High-throughput FACS-based mutant screen identifies a gain-of-function allele of the Fusarium graminearum adenylyl cyclase causing deoxynivalenol over-production

Blum, A., Benfield, A. H., Stiller, J., Kazan, K., Batley, J. & Gardiner, D. M. 2016 In : Fungal Genetics and Biology. 90, p. 1-11

Research output: Contribution to journalArticle

Fusarium
Adenylyl Cyclases
Flow Cytometry
Alleles
Triticum
3 Citations

Molecular-cytogenetic characterization of C-genome chromosome substitution lines in Brassica juncea (L.) Czern and Coss.

Gupta, M., Mason, A. S., Batley, J., Bharti, S., Banga, S. & Banga, S. S. Jun 2016 In : Theoretical and Applied Genetics. 129, 6, p. 1153-1166

Research output: Contribution to journalArticle

Chromosomes, Human, 6-12 and X
substitution lines
Mustard Plant
Brassica juncea
cytogenetics

Plant Genomics and Climate Change

Edwards, D. (ed.) & Batley, J. (ed.) 2016 Springer-Verlag London Ltd.

Research output: Book/ReportEdited book/Anthology

SNP analysis of Macadamia integrifolia chloroplast genomes to determine the genetic structure of wild populations

Ahmad Termizi, A. A., Hardner, C. M., Batley, J., Nock, C. J., Hayashi, S., Montenegro, J. D. & Edwards, D. 2016 Acta Horticulturae. Wirthensohn, M. (ed.). Acta Horticulturae, Vol. 1109, p. 175-180 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference paper

Macadamia integrifolia
Mirabilis expansa
Macadamia
single nucleotide polymorphism
cultivars
8 Citations
Open Access
File
bioinformatics
climate change
genomics
crops
breeding
3 Citations

The Fdb3 transcription factor of the Fusarium Detoxification of Benzoxazolinone gene cluster is required for MBOA but not BOA degradation in Fusarium pseudograminearum

Kettle, A. J., Carere, J., Batley, J., Manners, J. M., Kazan, K. & Gardiner, D. M. 2016 In : Fungal Genetics and Biology. 88, p. 44-53

Research output: Contribution to journalArticle

Fusarium
Multigene Family
Transcription Factors
Aminophenols
Genes
8 Citations

The genome of a southern hemisphere seagrass species (Zostera muelleri)

Lee, H., Golicz, A. A., Bayer, P. E., Jiao, Y., Tang, H., Paterson, A. H., Sablok, G., Krishnaraj, R. R., Chan, C-K. K., Batley, J., Kendrick, G. A., Larkum, A. W. D., Ralph, P. J. & Edwards, D. Sep 2016 In : Plant Physiology. 172, 1, p. 272-283

Research output: Contribution to journalArticle

Open Access
Zosteraceae
Zostera
Oceans and Seas
Carbon Sequestration
Genome

The More the Merrier? Investigating Copy Number Variation in Brassica Disease Resistance

Batley, J., Dolatabadian, A., Yang, H., Severn-Ellis, A., Alamery, S., Tollenaere, R., Bayer, P., Hurgobin, B., Golicz, A. A. & Edwards, D. 2016

Research output: Contribution to conferencePoster

20 Citations

The pangenome of an agronomically important crop plant Brassica oleracea

Golicz, A. A., Bayer, P. E., Barker, G. C., Edger, P. P., Kim, H. R., Martinez, P. A., Chan, C. K. K., Severn-Ellis, A., McCombie, W. R., Parkin, I. A. P., Paterson, A. H., Pires, J. C., Sharpe, A. G., Tang, H., Teakle, G. R., Town, C. D., Batley, J. & Edwards, D. 11 Nov 2016 In : Nature Communications. 7, 13390

Research output: Contribution to journalArticle

Open Access
Brassica
crops
genes
Crops
Genes
18 Citations

Towards plant pangenomics

Golicz, A. A., Batley, J. & Edwards, D. 2016 In : Plant Biotechnology Journal. 14, 4, p. 1099–1105

Research output: Contribution to journalReview article

11 Citations

Type B heterotrimeric G protein γ subunit regulates 19 auxin and ABA signaling in tomato

Subramaniam, G., Trusov, Y., Lopez-Encina, C., Hayashi, S., Batley, J. & Botella, J. R. 2016 In : Plant Physiology. 170, p. 1117-1134

Research output: Contribution to journalArticle

2015
2 Citations
Open Access

Advanced in Plant Genotyping: Where the Future Will Take Us

Patel, D. A., Zander, M., Dalton-Morgan, J. & Batley, J. 2015 Plant Genotyping. Batley, J. (ed.). 1 ed. United States: Springer, p. 1 - 11 (Methods in Molecular Biology)

Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

49 Citations

Application of genomics-assisted breeding for generation of climate resilient crops: Progress and prospects

Kole, C. , Muthamilarasan, M. , Henry, R. , Edwards, D. , Sharma, R. , Abberton, M. , Batley, J. , Bentley, A. , Blakeney, M. , Bryant, J. , Cai, H. , Cakir, M. , Cseke, L. J. , Cockram, J. , De Oliveira, A. C. , De Pace, C. , Dempewolf, H. , Ellison, S. , Gepts, P. , Greenland, A. & 20 others Hall, A., Hori, K., Hughes, S., Humphreys, M. W., Iorizzo, M., Ismail, A. M., Marshall, A., Mayes, S., Nguyen, H. T., Ogbonnaya, F. C., Ortiz, R., Paterson, A. H., Simon, P. W., Tohme, J., Tuberosa, R., Valliyodan, B., Varshney, R. K., Wullschleger, S. D., Yano, M. & Prasad, M. 11 Aug 2015 In : Frontiers in Plant Science. 6, AUG, p. Article 563

Research output: Contribution to journalArticle

Open Access
climate
genomics
breeding
climate change
crops
13 Citations

A γ-lactamase from cereal infecting Fusarium spp. catalyses the first step in the degradation of the benzoxazolinone class of phytoalexins

Kettle, A. J., Carere, J., Batley, J., Benfield, A. H., Manners, J. M., Kazan, K. & Gardiner, D. M. 2015 In : Fungal Genetics and Biology. 83, p. 1-9

Research output: Contribution to journalArticle

Fusarium
Triticum
Gene Deletion
Enzymes
Multigene Family
28 Citations

BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes

Stankova, H., Hastie, A. R., Chan, S., Vrana, J., Tulpova, Z., Kubalakova, M., Visendi, P., Hayashi, S., Luo, M., Batley, J., Edwards, D., Dolezel, J. & Simkova, H. 2015 In : Plant Biotechnology Journal. 2015, p. 1-9

Research output: Contribution to journalArticle

Open Access