Hari Upadhyaya

2022

Author Correction: A chickpea genetic variation map based on the sequencing of 3,366 genomes (Nature, (2021), 599, 7886, (622-627), 10.1038/s41586-021-04066-1)

Varshney, R. K., Roorkiwal, M., Sun, S., Bajaj, P., Chitikineni, A., Thudi, M., Singh, N. P., Du, X., Upadhyaya, H. D., Khan, A. W., Wang, Y., Garg, V., Fan, G., Cowling, W. A., Crossa, J., Gentzbittel, L., Voss-Fels, K. P., Valluri, V. K., Sinha, P., Singh, V. K., & 37 othersBen, C., Rathore, A., Punna, R., Singh, M. K., Tar’an, B., Bharadwaj, C., Yasin, M., Pithia, M. S., Singh, S., Soren, K. R., Kudapa, H., Jarquín, D., Cubry, P., Hickey, L. T., Dixit, G. P., Thuillet, A. C., Hamwieh, A., Kumar, S., Deokar, A. A., Chaturvedi, S. K., Francis, A., Howard, R., Chattopadhyay, D., Edwards, D., Lyons, E., Vigouroux, Y., Hayes, B. J., von Wettberg, E., Datta, S. K., Yang, H., Nguyen, H. T., Wang, J., Siddique, K. H. M., Mohapatra, T., Bennetzen, J. L., Xu, X. & Liu, X., 14 Apr 2022, In: Nature. 604, 7905, p. E12

Research output: Contribution to journal › Comment/debate › peer-review

Open Access

2021

A chickpea genetic variation map based on the sequencing of 3,366 genomes

Varshney, R. K., Roorkiwal, M., Sun, S., Bajaj, P., Chitikineni, A., Thudi, M., Singh, N. P., Du, X., Upadhyaya, H. D., Khan, A. W., Wang, Y., Garg, V., Fan, G., Cowling, W. A., Crossa, J., Gentzbittel, L., Voss-Fels, K. P., Valluri, V. K., Sinha, P., Singh, V. K., & 37 othersBen, C., Rathore, A., Punna, R., Singh, M. K., Tar’an, B., Bharadwaj, C., Yasin, M., Pithia, M. S., Singh, S., Soren, K. R., Kudapa, H., Jarquín, D., Cubry, P., Hickey, L. T., Dixit, G. P., Thuillet, A. C., Hamwieh, A., Kumar, S., Deokar, A. A., Chaturvedi, S. K., Francis, A., Howard, R., Chattopadhyay, D., Edwards, D., Lyons, E., Vigouroux, Y., Hayes, B. J., von Wettberg, E., Datta, S. K., Yang, H., Nguyen, H. T., Wang, J., Siddique, K. H. M., Mohapatra, T., Bennetzen, J. L., Xu, X. & Liu, X., 25 Nov 2021, In: Nature. 599, 7886, p. 622-627 6 p.

Research output: Contribution to journal › Article › peer-review

Open Access

72 Citations (Scopus)

2019

Multi-Trait Diverse Germplasm Sources from Mini Core Collection for Sorghum Improvement

Upadhyaya, H. D., Vetriventhan, M., Asiri, A. M., Azevedo, V. C. R., Sharma, H. C., Sharma, R., Sharma, S. P. & Wang, Y-H., Jun 2019, In: Agriculture. 9, 6, 17 p., 121.

Research output: Contribution to journal › Article › peer-review

Open Access

10 Citations (Scopus)

Sorghum Genetic Resources

Upadhyaya, H. D., Dwivedi, S. L., Wang, Y-H. & Vetriventhan, M., 1 Jan 2019, Sorghum: State of the Art and Future Perspectives. Ciampitti, I. & Prasad, V. (eds.). Madison, WI: American Society of Agronomy and Crop Science Society of America, Inc., Vol. 58. p. 47-72 26 p. (Agronomy Monographs; vol. 58).

Research output: Chapter in Book/Conference paper › Chapter › peer-review

3 Citations (Scopus)

2018

Diversity and trait-specific sources for productivity and nutritional traits in the global proso millet (Panicum miliaceum L.) germplasm collection

Vetriventhan, M. & Upadhyaya, H. D., 1 Oct 2018, In: Crop Journal. 6, 5, p. 451-463 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

41 Citations (Scopus)

Identification of promising sources for fodder traits in the world collection of pearl millet at the ICRISAT genebank

Upadhyaya, H. D., Reddy, K. N., Pattanashetti, S. K., Kumar, V. & Ramachandran, S., 1 Apr 2018, In: Plant Genetic Resources: Characterisation and Utilisation. 16, 2, p. 127-136 10 p.

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

Latitudinal adaptation of flowering response to photoperiod and temperature in the world collection of sorghum landraces

Upadhyaya, H. D., Reddy, K. N., Vetriventhan, M., Irshad Ahmed, M. & Thimma Reddy, M., 1 May 2018, In: Crop Science. 58, 3, p. 1265-1276 12 p.

Research output: Contribution to journal › Article › peer-review

3 Citations (Scopus)

2017

Characterization and genetic potential of African pearl millet named landraces conserved at the ICRISAT genebank

Upadhyaya, H. D., Reddy, K. N., Irshad Ahmed, M., Ramachandran, S., Kumar, V. & Singh, S., 1 Oct 2017, In: Plant Genetic Resources: Characterisation and Utilisation. 15, 5, p. 438-452 15 p.

Research output: Contribution to journal › Article › peer-review

6 Citations (Scopus)

Development and Evaluation of a High Density Genotyping 'Axiom-Arachis' Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut

Pandey, M. K., Agarwal, G., Kale, S. M., Clevenger, J., Nayak, S. N., Sriswathi, M., Chitikineni, A., Chavarro, C., Chen, X., Upadhyaya, H. D., Vishwakarma, M. K., Leal-Bertioli, S., Liang, X., Bertioli, D. J., Guo, B., Jackson, S. A., Ozias-Akins, P. & Varshney, R. K., 16 Jan 2017, In: Scientific Reports. 7, 40577.

Research output: Contribution to journal › Article › peer-review

Open Access

116 Citations (Scopus)

Genetic Resources of Pearl Millet: Status and Utilization

Yadav, OP., Upadhyaya, H., Reddy, K. N., Jukanti, A. K., Pandey, S. & Tyagi, RK., 2017, In: Indian Journal of Plant Genetic Resources. 30, 1, p. 31-47

Research output: Contribution to journal › Review article › peer-review

Genotypic variation in soil water use and root distribution and their implications for drought tolerance in chickpea

Purushothaman, R., Krishnamurthy, L., Upadhyaya, H. D., Vadez, V. & Varshney, R. K., 2017, In: Functional Plant Biology. 44, 2, p. 235-252 18 p.

Research output: Contribution to journal › Article › peer-review

Open Access

33 Citations (Scopus)

Geographical distribution, diversity and gap analysis of East African sorghum collection conserved at the ICRISAT genebank

Upadhyaya, H. D., Reddy, K. N., Vetriventhan, M., Murali Krishna, G., Irshad Ahmed, M., Manyasa, E., Thimma Reddy, M. & Singh, S. K., 1 Apr 2017, In: Australian Journal of Crop Science. 11, 4, p. 424-437 14 p.

Research output: Contribution to journal › Article › peer-review

2 Citations (Scopus)

Geographical distribution of traits and diversity in the world collection of pearl millet [Pennisetum glaucum (L.) R. Br., synonym: Cenchrus americanus (L.) Morrone] landraces conserved at the ICRISAT genebank

Upadhyaya, H. D., Reddy, K. N., Ahmed, M. I., Kumar, V., Gumma, M. K. & Ramachandran, S., Aug 2017, In: Genetic Resources and Crop Evolution. 64, 6, p. 1365–1381 17 p.

Research output: Contribution to journal › Article › peer-review

14 Citations (Web of Science)

Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments

Varshney, R. K., Shi, C., Thudi, M., Mariac, C., Wallace, J., Qi, P., Zhang, H., Zhao, Y., Wang, X., Rathore, A., Srivastava, R. K., Chitikineni, A., Fan, G., Bajaj, P., Punnuri, S., Gupta, S. K., Wang, H., Jiang, Y., Couderc, M., Katta, M. A. V. S. K., & 45 othersPaudel, D. R., Mungra, K. D., Chen, W., Harris-Shultz, K. R., Garg, V., Desai, N., Doddamani, D., Kane, N. A., Conner, J. A., Ghatak, A., Chaturvedi, P., Subramaniam, S., Yadav, O. P., Berthouly-Salazar, C., Hamidou, F., Wang, J., Liang, X., Clotault, J., Upadhyaya, H. D., Cubry, P., Rhoné, B., Gueye, M. C., Sunkar, R., Dupuy, C., Sparvoli, F., Cheng, S., Mahala, R. S., Singh, B., Yadav, R. S., Lyons, E., Datta, S. K., Tom Hash, C., Devos, K. M., Buckler, E., Bennetzen, J. L., Paterson, A. H., Ozias-Akins, P., Grando, S., Wang, J., Mohapatra, T., Weckwerth, W., Reif, J. C., Liu, X., Vigouroux, Y. & Xu, X., 1 Oct 2017, In: Nature Biotechnology. 35, 10, p. 969-976 8 p.

Research output: Contribution to journal › Article › peer-review

Open Access

246 Citations (Scopus)

Root traits confer grain yield advantages under terminal drought in chickpea (Cicer arietinum L.)

Ramamoorthy, P., Lakshmanan, K., Upadhyaya, H. D., Vadez, V. & Varshney, R. K., 1 Feb 2017, In: Field Crops Research. 201, p. 146-161 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

65 Citations (Scopus)

Sorghum germplasm from West and Central Africa maintained in the ICRISAT genebank: Status, gaps, and diversity

Upadhyaya, H. D., Narsimha Reddy, K., Vetriventhan, M., Irshad Ahmed, M., Murali Krishna, G., Thimma Reddy, M. & Singh, S. K., 1 Dec 2017, In: Crop Journal. 5, 6, p. 518-532 15 p.

Research output: Contribution to journal › Article › peer-review

Open Access

5 Citations (Scopus)

Status, genetic diversity and gaps in sorghum germplasm from South Asia conserved at ICRISAT genebank

Upadhyaya, H. D., Reddy, K. N., Vetriventhan, M., Krishna Gumma, M., Irshad Ahmed, M., Thimma Reddy, M. & Singh, S. K., Dec 2017, In: Plant Genetic Resources: Characterisation and Utilisation. 15, 6, p. 527-538 12 p.

Research output: Contribution to journal › Article › peer-review

5 Citations (Scopus)

Whole-genome resequencing of 292 pigeonpea accessions identifies genomic regions associated with domestication and agronomic traits

Varshney, R. K., Saxena, R. K., Upadhyaya, H. D., Khan, A. W., Yu, Y., Kim, C., Rathore, A., Kim, D., Kim, J., An, S., Kumar, V., Anuradha, G., Yamini, K. N., Zhang, W., Muniswamy, S., Kim, J-S., Penmetsa, R. V., von Wettberg, E. & Datta, S. K., Jul 2017, In: Nature Genetics. 49, 7, p. 1082-1088 7 p.

Research output: Contribution to journal › Article › peer-review

154 Citations (Scopus)

2016

Adaptation pattern and genetic potential of Indian pearl millet named landraces conserved at the ICRISAT genebank

Upadhyaya, H., Reddy, K. N., Ramachandran, S., Kumar, V. & Ahmed, M. I., 2016, In: Indian Journal of Plant Genetic Resources. 29, 2, p. 97-113 17 p.

Research output: Contribution to journal › Article › peer-review

Exploiting phenylpropanoid derivatives to enhance the nutraceutical values of cereals and legumes

Dwivedi, S. L., Upadhyaya, H. D., Chung, I. M., De Vita, P., García-Lara, S., Guajardo-Flores, D., Gutiérrez-Uribe, J. A., Serna-Saldívar, S. O., Rajakumar, G., Sahrawat, K. L., Kumar, J. & Ortiz, R., 3 Jun 2016, In: Frontiers in Plant Science. 7, JUNE2016, 763.

Research output: Contribution to journal › Review article

Open Access

21 Citations (Scopus)

Genetic variation and postflowering drought effects on seed iron and zinc in ICRISAT sorghum mini core collection

Upadhyaya, H., Dwivedi, S. L., Singh, S., Sahrawat, K. L. & Singh, S. K., Jan 2016, In: Crop Science. 56, 1, p. 374-384 11 p.

Research output: Contribution to journal › Article › peer-review

22 Citations (Scopus)

Global Resources of Genetic Diversity in Peanut

Barkley, N. A., Upadhyaya, H. D., Liao, B. & Corley Holbrook, C., 4 Jan 2016, Peanuts: Genetics, Processing, and Utilization. Stalker, T. & Wilson, R. (eds.). Elsevier, p. 67-109 43 p.

Research output: Chapter in Book/Conference paper › Chapter › peer-review

7 Citations (Scopus)

Shoot traits and their relevance in terminal drought tolerance of chickpea (Cicer arietinum L.)

Ramamoorthy, P., Lakshmanan, K., Upadhyaya, H., Vadez, V. & Varshney, R., 1 Oct 2016, In: Field Crops Research. 197, p. 10-27 18 p.

Research output: Contribution to journal › Article › peer-review

Open Access

53 Citations (Scopus)

Sorghum Germplasm Resources Characterization and Trait Mapping

Upadhyaya, H. D., Vetriventhan, M. & Deshpande, S., 2016, The Sorghum Genome. Rakshit, S. & Wang, Y-H. (eds.). Springer International Publishing, p. 77-94 18 p. (Compendium of Plant Genomes).

Research output: Chapter in Book/Conference paper › Chapter › peer-review

4 Citations (Web of Science)

Variation in drought-tolerance components and their interrelationships in the core collection of foxtail millet (Setaria italica) germplasm

Krishnamurthy, L., Upadhyaya, H., Kashiwagi, J., Purushothaman, R., Dwivedi, S. L. & Vadez, V., 2016, In: Crop and Pasture Science. 67, 8, p. 834-846 13 p.

Research output: Contribution to journal › Article › peer-review

9 Citations (Scopus)

Variation in drought-tolerance components and their interrelationships in the minicore collection of finger millet germplasm

Krishnamurthy, L., Upadhyaya, H., Kashiwagi, J., Purushothaman, R., Dwivedi, S. L. & Vadez, V., 1 Jul 2016, In: Crop Science. 56, 4, p. 1914-1926 13 p.

Research output: Contribution to journal › Article › peer-review

14 Citations (Scopus)

2015

Advances in Host Plant and Rhizobium Genomics to Enhance Symbiotic Nitrogen Fixation inGrain Legumes

Dwivedi, S. L., Sahrawat, K. L., Upadhyaya, H., Mengoni, A., Galardini, M., Bazzicalupo, M., Biondi, E. G., Hungría, M., Kaschuk, G., Blair, M. W. & Ortiz, R., 2015, In: Advances in Agronomy. 129, p. 1-116

Research output: Contribution to journal › Article › peer-review

75 Citations (Scopus)

Assessing genetic variability for root traits and identification of trait-specific germplasm in chickpea reference set

Lalitha, N., Upadhyaya, H., Krishnamurthy, L., Kashiwagi, J., Kavikishor, P. B. & Singh, S., 2015, In: Crop Science. 55, 5, p. 2034-2045

Research output: Contribution to journal › Article › peer-review

9 Citations (Scopus)

Association mapping of germinability and seedling vigor in sorghum under controlled low-temperature conditions

Upadhyaya, H., Wang, Y. H., Sastry, D. V. S. S. R., Dwivedi, S. L., Prasad, P. V. V., Burrell, A. M., Klein, R. R., Morris, G. P. & Klein, P. E., 2015, In: Genome. 59, 2, p. 137-145

Research output: Contribution to journal › Article › peer-review

28 Citations (Scopus)

Crop wild relatives of pigeonpea [Cajanus cajan (L.) Millsp.]: Distributions, ex situ conservation status, and potential genetic resources for abiotic stress tolerance

Khoury, C. K., Castañeda-Álvarez, N. P., Kassa, M. T., Upadhyaya, H., Ramírez-Villegas, J., Jarvis, A. C. & Struik, P. C., 2015, In: Biological Conservation. 184, p. 259-270

Research output: Contribution to journal › Article › peer-review

Open Access

82 Citations (Scopus)

Establishing core collections for enhanced use of germplasm in crop improvement

Upadhyaya, H. D., 2015, In: Ekin Journal of Crop Breeding and Genetics. 1:1

Research output: Contribution to journal › Review article

Genome-environment associations in sorghum landraces predict adaptive traits

Lasky, J. R., Upadhyaya, H., Ramu, P., Deshpande, S., Hash, C. T., Bonnette, J., Juenger, T. E., Hyma, K., Acharya, C., Mitchell, S. E., Buckler, E. S., Brenton, Z., Kresovich, S. & Morris, G. P., 2015, In: Science Advances. 1, p. 1-13

Research output: Contribution to journal › Article › peer-review

Open Access

172 Citations (Scopus)

Haploids: Constraints and opportunities in plant breeding

Dwivedi, S. L., Britt, A. B., Tripathi, L., Sharma, S., Upadhyaya, H. & Ortiz, R., 2015, In: Biotechnology Advances. 33, 6, Part 1, p. 812-829

Research output: Contribution to journal › Review article

144 Citations (Scopus)

Identification of gaps in pigeonpea germplasm from East and Southern Africa conserved at the ICRISAT genebank

Upadhyaya, H., Reddy, K. N., Ahmed, M. I., Gowda, CLL., Thimma Reddy, M. & Ramachandran, S., 2015, In: Indian Journal of Plant Genetic Resources. 28, 2, p. 180-188 9 p.

Research output: Contribution to journal › Article › peer-review

Iniadi pearl millet germplasm as a valuable genetic resource for high grain iron and zinc densities

Rai, K. N., Velu, G., Govindaraj, M., Upadhyaya, H., Rao, A. S., Shivade, H. & Reddy, K. N., 2015, In: Plant Genetic Resources: Characterisation and Utilisation. 13, p. 75-82

Research output: Contribution to journal › Article › peer-review

24 Citations (Scopus)

International agricultural research to reduce food risks: case studies on aflatoxins

Grace, D., Mahuku, G., Hoffmann, V., Atherstone, C., Upadhyaya, H. & Bandyopadhyay, R., 2015, In: Food Security. 7, 3, p. 569-582

Research output: Contribution to journal › Article › peer-review

Open Access

54 Citations (Scopus)

Molecular diagnosis to identify new sources of resistance to sclerotinia blight in groundnut (Arachis hypogaea L.)

Yol, E., Upadhyaya, H. & Uzun, B., 2015, In: Euphytica. 203-, p. 367-374

Research output: Contribution to journal › Article › peer-review

7 Citations (Scopus)

Population genetics and structure of a global foxtail millet germplasm collection

Upadhyaya, H., Vetriventhan, M., Deshpande, S. P., Sivasubramani, S., Wallace, J. G., Buckler, E. S., Hash, C. T. & Ramu, P., 2015, In: Plant Genome. 8, 3, p. 1-13

Research output: Contribution to journal › Article › peer-review

24 Citations (Scopus)

Resistance to late leaf spot and rust diseases in ICRISAT’s mini core collection of peanut (Arachis hypogaea L.)

Sudini, H., Upadhyaya, H., Reddy, S. V., Naga Mangala, U., Rathore, A. & Vijay Krishna Kumar, K., 2015, In: Australasian Plant Pathology. 44, 5, p. 557-566

Research output: Contribution to journal › Article › peer-review

15 Citations (Scopus)

Selection of host differentials for elucidating pathogenic variation in Magnaporthe grisea populations adapted to finger millet (Eleusine coracana)

Babu, T. K., Sharma, R., Thakur, R. P., Upadhyaya, H., Reddy, P. N. & Girish, A. G., 2015, In: Plant Disease. 99, 12, p. 1784-1789

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

2014

Allele diversity for abiotic stress responsive candidate genes in chickpea reference set using gene based SNP markers

Roorkiwal, M., Nayak, S., Thudi, M., Upadhyaya, H., Brunel, D., Mournet, P., This, D., Sharma, P. C. & Varshney, R. K., 2014, In: Frontiers in Plant Science. 5, 248, p. 1-11

Research output: Contribution to journal › Article › peer-review

Open Access

42 Citations (Scopus)

An efficient and cost-effective approach for genic microsatellite marker-based large-scale trait association mapping: Identification of candidate genes for seed weight in chickpea

Kujur, A., Bajaj, D., Saxena, M. S., Tripathi, S., Upadhyaya, H., Gowda, C. L. L., Singh, S., Tyagi, A. K., Jain, M. & Parida, S. K., 2014, In: Molecular Breeding. 34, p. 241-265

Research output: Contribution to journal › Article › peer-review

34 Citations (Scopus)

A SSR kit to study genetic diversity in chickpea (Cicer arietinum L.)

Varshney, R., Thudi, M., Upadhyaya, H., Dwivedi, S., Udupa, S., Furman, B., Baum, M. & Hoisington, D., 2014, In: Plant Genetic Resources: Characterisation and Utilisation. 12, S1, p. S118-S120

Research output: Contribution to journal › Article › peer-review

4 Citations (Scopus)

Development and molecular characterization of genic molecular markers for grain protein and calcium content in finger millet (Eleusine coracana (L.) Gaertn.)

Nirgude, M., Babu, B. K., Shambhavi, Y., Singh, U. M., Upadhyaya, H. & Kumar, A., 2014, In: Molecular Biology Reports. 41, p. 1189–1200

Research output: Contribution to journal › Article › peer-review

54 Citations (Scopus)

Diversification of primary gene pool through introgression of resistance to foliar diseases from synthetic amphidiploids to cultivated groundnut (Arachis hypogaea L.)

Kumari, V., Gowda, M. V. C., Tasiwal, V., Pandey, M. K., Bhat, R. S., Mallikarjuna, N., Upadhyaya, H. & Varshney, R. K., 2014, In: The Crop Journal. 2, 2-3, p. 110-119

Research output: Contribution to journal › Article › peer-review

Open Access

23 Citations (Scopus)

Diversity and gaps in Pennisetum glaucum subsp. monodii (Maire) Br. Germplasm conserved at the ICRISAT genebank

Upadhyaya, H., Reddy, K. N., Singh, S., Gowda, C. L. L., Ahmed, M. I. & Kumar, V., 2014, In: Plant Genetic Resources. 12, 2, p. 226–235

Research output: Contribution to journal › Article › peer-review

7 Citations (Scopus)

Enhancement of the use and impact of germplasm in crop improvement

Upadhyaya, H., Dwivedi, S. L., Sharma, S., Lalitha, N., Singh, S., Varshney, R. K. & Gowda, C. L. L., 2014, In: Plant Genetic Resources: Characterisation and Utilisation. 12, p. S155-S159

Research output: Contribution to journal › Article › peer-review

8 Citations (Scopus)

Ethnolinguistic structuring of sorghum genetic diversity in Africa and the role of local seed systems

Westengen, O. T., Okongo, M. A., Onek, L., Berg, T., Upadhyaya, H., Birkeland, S., Khalsa, S. D. K., Ring, K. H., Stenseth, N. C. & Brysting, A. K., 2014, In: Proceedings of the National Academy of Sciences of the United States of America. 111, 39, p. 14100-14105

Research output: Contribution to journal › Article › peer-review

41 Citations (Scopus)

Exploring germplasm diversity to understand the domestication process in Cicer spp. using SNP and DArT markers

Roorkiwal, M., Von Wettberg, E. J., Upadhyaya, H., Warschefsky, E., Rathore, A. & Varshney, R. K., 2014, In: PLoS One. 9, 7, p. 1-10

Research output: Contribution to journal › Article › peer-review

Open Access

35 Citations (Scopus)

Forming core collections in barnyard, kodo, and little millets using morphoagronomic descriptors

Upadhyaya, H., Dwivedi, S. L., Singh, S., Singh, S. P., Vetriventhan, M. & Sharma, S. B., 2014, In: Crop Science. 54, 6, p. 2673-2682

Research output: Contribution to journal › Article › peer-review

49 Citations (Scopus)

Hari Upadhyaya

Research output

Search results