Research Output 1957 2020

2020

A new method for mapping spatial resolution in compound eyes suggests two visual streaks in fiddler crabs

Bagheri, Z., Jessop, A., Kato, S., Partridge, J., Shaw, J., Ogawa, Y. & Hemmi, J., 8 Jan 2020, In : The Journal of Experimental Biology. 223, 1, jeb210195.

Research output: Contribution to journalArticle

compound eyes
crab
crabs
spatial resolution
ommatidia
1 Citation (Scopus)

Antibiotics in poultry manure and their associated health issues: a systematic review

Muhammad, J., Khan, S., Su, J. Q., Hesham, A. E. L., Ditta, A., Nawab, J. & Ali, A., 2020, In : Journal of Soils and Sediments. 20, p. 486–497

Research output: Contribution to journalReview article

poultry
antibiotics
manure
antibiotic resistance
gene

Digging up the dirt: Quantifying the effects on soil of a translocated ecosystem engineer

Halstead, L. M., Sutherland, D. R., Valentine, L. E., Rendall, A. R., Coetsee, A. L. & Ritchie, E. G., 1 Feb 2020, In : Austral Ecology. 45, 1, p. 97-108

Research output: Contribution to journalArticle

foraging
ecosystem
soil
mammals
turnover

Effect of elevated magnesium sulfate on two riparian tree species impacted by mine site contamination

Canham, C., Cavalieri, O., Setterfield, S., Freestone, F. & Hutley, L. B., 2020, (Accepted/In press) In : Scientific Reports.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Epigenetic modification of cytosines fine tunes the stability of i-motif DNA

Wright, E. P., Abdelhamid, M. A. S., Ehiabor, M. O., Grigg, M., Irving, K., Smith, N. & Waller, Z. A. E., 10 Jan 2020, In : Nucleic Acids Research. 48, 1, 8 p.

Research output: Contribution to journalArticle

Open Access
Nucleotide Motifs
Cytosine
Epigenomics
5-Methylcytosine
Nanotechnology
fire severity
tree mortality
wildfires
understory
wildfire
Banksia
swans
coastal plains
coastal plain
Western Australia

Legume pangenome construction using an iterative mapping and assembly approach

Hu, H., Yuan, Y., Bayer, P. E., Fernandez, C. T., Scheben, A., Golicz, A. A. & Edwards, D., 1 Jan 2020, Legume Genomics: Methods and Protocols. Jain, M. & Garg, R. (eds.). New York: Humana Press, Vol. 2107. p. 35-47 13 p. (Methods in Molecular Biology; vol. 2107).

Research output: Chapter in Book/Conference paperChapter

Fabaceae
Genome
Technology
Phenotype
Genes

Species-specific smoke effects on seed germination of plants from different habitats from Sri Lanka

Alahakoon, A. A. C. B., Perera, G. A. D., Merritt, D. J., Turner, S. R. & Gama-Arachchige, N. S., 1 Feb 2020, In : Flora: Morphology, Distribution, Functional Ecology of Plants. 263, 151530.

Research output: Contribution to journalArticle

Open Access
Sri Lanka
smoke
germination
seed germination
seed

Stygofaunal community trends along varied rainfall conditions: Deciphering ecological niche dynamics of a shallow calcrete in Western Australia

Sacco, M., Blyth, A. J., Humphreys, W. F., Karasiewicz, S., Meredith, K. T., Laini, A., Cooper, S. J. B., Bateman, P. W. & Grice, K., Jan 2020, In : Ecohydrology. 13, 1, 19 p., 2150.

Research output: Contribution to journalArticle

Supplementary Calcium Restores Peanut (Arachis hypogaea) Growth and Photosynthetic Capacity Under Low Nocturnal Temperature

Song, Q., Liu, Y., Pang, J., Wan Hong Yong, J., Chen, Y., Bai, C., Gille, C., Shi, Q., Wu, D., Han, X., Li, T., Siddique, K. H. M. & Lambers, H., 21 Jan 2020, In : Frontiers in Plant Science. 10, 15 p., 1637.

Research output: Contribution to journalArticle

Open Access
Arachis hypogaea
peanuts
calcium
temperature
calmodulin

The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat

Feng, K., Cui, L., Wang, L., Shan, D., Tong, W., Deng, P., Yan, Z., Wang, M., Zhan, H., Wu, X., He, W., Zhou, X., Ji, J., Zhang, G., Mao, L., Karafiátová, M., Šimková, H., Doležel, J., Du, X., Zhao, S. & 8 othersLuo, M. C., Han, D., Zhang, C., Kang, Z., Appels, R., Edwards, D., Nie, X. & Weining, S., 1 Mar 2020, In : Plant Biotechnology Journal. 18, 3, p. 732-742 11 p.

Research output: Contribution to journalArticle

Open Access
Bread
Triticum
Chromosomes
chromosomes
wheat

Towards the Development of an Integrative, Evidence-Based Suite of Indicators for the Prediction of Outcome Following Mild Traumatic Brain Injury: Results from a Pilot Study

Gozt, A., Licari, M., Halstrom, A., Milbourn, H., Lydiard, S., Black, A., Arendts, G., Macdonald, S., Song, S., MacDonald, E., Vlaskovsky, P., Burrows, S., Bynevelt, M., Pestell, C., Fatovich, D. & Fitzgerald, M., 2 Jan 2020, In : Brain Sciences. 10, 1

Research output: Contribution to journalArticle

Open Access
Post-Concussion Syndrome
Brain Concussion
Glial Fibrillary Acidic Protein
Anisotropy
Hospital Emergency Service
4 Citations (Scopus)

TRY plant trait database – enhanced coverage and open access

The Nutrient Network, 1 Jan 2020, In : Global Change Biology. 26, 1, p. 119-188 70 p.

Research output: Contribution to journalArticle

Open Access
Ecology
Ecosystems
Biodiversity
Restoration
Conservation
1 Citation (Scopus)

Using harmonized historical catch data to infer the expansion of global tuna fisheries

Coulter, A., Cashion, T., Cisneros-Montemayor, A. M., Popov, S., Tsui, G., Sy, E., Le Manach, F., Palomares, M. L. D., Zeller, D. & Pauly, D., 2020, In : Fisheries Research. 221, 105379.

Research output: Contribution to journalArticle

base flow
baseflow
Water resources
river flow
water resources
2019
1 Citation (Scopus)

2,500 Years of Hydroclimate Variability in New Mexico, USA

Oliver, J. S., Harley, G. L. & Maxwell, J. T., 28 Apr 2019, In : Geophysical Research Letters. 46, 8, p. 4432-4440 9 p.

Research output: Contribution to journalArticle

drought
twenty first century
conifers
Rocky Mountains (North America)
water planning
1 Citation (Scopus)

5-aminolevolinic acid enhances sunflower resistance to Orobanche cumana (Broomrape)

Li, J., Yang, C., Liu, H., Cao, M., Yan, G., Si, P., Zhou, W. & Xu, L., 15 Nov 2019, In : Industrial Crops and Products. 140, 111467.

Research output: Contribution to journalArticle

Orobanche cernua
Helianthus annuus
acids
reactive oxygen species
malondialdehyde
4 Citations (Scopus)

A broader circumscription of Bulbostylis including Nemum (Abildgaardieae: Cyperaceae)

Roalson, E. H., Prata, A. P., Mesterhazy, A., Chase, M. W., Simpson, D. A., Thomas, W. W. & Larridon, I., 11 Mar 2019, In : Phytotaxa. 395, 3, p. 199-208 10 p.

Research output: Contribution to journalArticle

Open Access
crocodiles
Crocodylus porosus
Crocodylus
monitoring
global change

Accessing the research: tools to support decision making

Beesley, L., Middleton, J., Gwinn, D., Quinton, B., Storer, T. & Davies, P., 2019.

Research output: Contribution to conferenceConference presentation/ephemera

A comparison of fecal sampling and direct feeding observations for quantifying the diet of a frugivorous primate

Matthews, J., Ridley, M., Kaplin, B. A. & Grueter, C., 26 Nov 2019, In : Current Zoology. 11 p., zoz058.

Research output: Contribution to journalArticle

Open Access
Primates
wild animals
diet
Pan troglodytes
sampling
6 Citations (Scopus)

A comprehensive and user-friendly framework for 3D-data visualisation in invertebrates and other organisms

Semple, T. L., Peakall, R. & Tatarnic, N. J., 1 Feb 2019, In : Journal of Morphology. 280, 2, p. 223-231 9 p.

Research output: Contribution to journalArticle

Open Access
Invertebrates
invertebrates
organisms
image analysis
micro-computed tomography
1 Citation (Scopus)
Open Access
2 Citations (Scopus)

Acquired resistance during adoptive cell therapy by transcriptional silencing of immunogenic antigens

Wylie, B., Chee, J., Forbes, C. A., Booth, M., Stone, S. R., Buzzai, A., Abad, A., Foley, B., Cruickshank, M. N. & Waithman, J., 31 May 2019, In : OncoImmunology. 11 p.

Research output: Contribution to journalArticle

Open Access
10 Citations (Scopus)

Adapting legume crops to climate change using genomic approaches

Mousavi-Derazmahalleh, M., Bayer, P. E., Hane, J. K., Babu, V., Nguyen, H. T., Nelson, M. N., Erskine, W., Varshney, R. K., Papa, R. & Edwards, D., 30 Jan 2019, In : Plant Cell and Environment. 42, 1, p. 6-19

Research output: Contribution to journalReview article

Open Access
Climate Change
Fabaceae
legumes
climate change
genomics
255 Downloads (Pure)

Adaptive potential of terrestrial-breeding amphibians in a drying climate

Rudin-Bitterli, T. S., 2019, (Unpublished)

Research output: ThesisDoctoral Thesis

File
amphibians
drying
climate
breeding
early development

A differential k-mer analysis pipeline for comparing RNA-Seq transcriptome and meta-transcriptome datasets without a reference

Chan, C. K. K., Rosic, N., Lorenc, M. T., Visendi, P., Lin, M., Kaniewska, P., Ferguson, B. J., Gresshoff, P. M., Batley, J. & Edwards, D., 1 Mar 2019, In : Functional and Integrative Genomics. 19, 2, p. 363-371 9 p.

Research output: Contribution to journalArticle

Transcriptome
RNA
Genome
Gene Expression
Anthozoa

Advancing the integration of multi-marker metabarcoding data in dietary analysis of trophic generalists

da Silva, L. P., Mata, V. A., Lopes, P. B., Pereira, P., Jarman, S. N., Lopes, R. J. & Beja, P., 22 Jul 2019, In : Molecular Ecology Resources.

Research output: Contribution to journalArticle

Open Access
generalist
Oenanthe
Boidae
Python
Arthropods
2 Citations (Scopus)

A Dynamic Optical Signal in a Nocturnal Moth

Kelley, J. L., Tatarnic, N. J., Schröder-Turk, G. E., Endler, J. A. & Wilts, B. D., 9 Sep 2019, In : Current Biology. 29, 17, p. 2919-2925 e2.

Research output: Contribution to journalArticle

Moths
moths
Light
Nanostructures
Butterflies
1 Citation (Scopus)
Chrysanthemoides monilifera
dendrochronology
aerial photography
stem
history
5 Citations (Scopus)

A field and video analysis guide for diver operated stereo-video

Goetze, J. S., Bond, T., McLean, D. L., Saunders, B. J., Langlois, T. J., Lindfield, S., Fullwood, L. A. F., Driessen, D., Shedrawi, G. & Harvey, E. S., Jul 2019, In : Methods in Ecology and Evolution. 10, 7, p. 1083-1090 8 p.

Research output: Contribution to journalArticle

177 Downloads (Pure)

A framework for developing mine-site completion criteria in Western Australia.

Young, R., Manero, A., Miller, B., Kragt, M., Standish, R. J., Jasper, D. & Boggs, G., Aug 2019, Perth, Western Australia: The Western Australian Biodiversity Science Institute. 176 p.

Research output: Book/ReportOther book

Open Access
File
monitoring
liability
mining industry
stakeholder
biodiversity
1 Citation (Scopus)

A full life cycle Dynamic Energy Budget (DEB) model for the green sea turtle (Chelonia mydas) fitted to data on embryonic development

Stubbs, J. L., Mitchell, N., Marn, N., Vanderklift, M., Pillans, R. & Augustine, S., Jan 2019, In : Journal of Sea Research. 143, p. 78-88

Research output: Contribution to journalArticle

embryonic development
energy budget
turtle
life cycle
maturation
5 Citations (Scopus)

Age estimation in a long-lived seabird (Ardenna tenuirostris) using DNA methylation-based biomarkers

De Paoli-Iseppi, R., Deagle, B. E., Polanowski, A. M., McMahon, C. R., Dickinson, J. L., Hindell, M. A. & Jarman, S. N., 1 Mar 2019, In : Molecular Ecology Resources. 19, 2, p. 411-425 15 p.

Research output: Contribution to journalArticle

methylation
DNA methylation
DNA Methylation
seabird
seabirds

A general framework for quantifying the effects of land-use history on ecosystem dynamics

Depauw, L., Landuyt, D., Perring, M. P., Blondeel, H., Maes, S. L., Kopecký, M., Máliš, F., Vanhellemont, M. & Verheyen, K., 30 May 2019, In : Ecological Indicators. 105395.

Research output: Contribution to journalArticle

ecosystem dynamics
land use
history
ecosystems
understory

A genome-wide search for local adaptation in a terrestrial-breeding frog reveals vulnerability to climate change

Cummins, D., Kennington, W. J., Rudin-Bitterli, T. & Mitchell, N. J., Sep 2019, In : Global Change Biology. 25, 9, p. 3151-3162 12 p.

Research output: Contribution to journalArticle

A genomic predictor of lifespan in vertebrates

Mayne, B., Berry, O., Davies, C., Farley, J. & Jarman, S., 12 Dec 2019, In : Scientific Reports. 9, 10 p., 17866.

Research output: Contribution to journalArticle

Open Access
DNA Methylation
Vertebrates
Genome
Epigenomics
Mammals
8 Citations (Scopus)

A global assessment of marine heatwaves and their drivers

Holbrook, N. J., Scannell, H. A., Sen Gupta, A., Benthuysen, J. A., Feng, M., Oliver, E. C. J., Alexander, L. V., Burrows, M. T., Donat, M. G., Hobday, A. J., Moore, P. J., Perkins-Kirkpatrick, S. E., Smale, D. A., Straub, S. C. & Wernberg, T., 14 Jun 2019, In : Nature Communications. 10, 2624.

Research output: Contribution to journalArticle

Open Access
Military Personnel
Climate
climate
Satellites
Oceans and Seas
3 Citations (Scopus)

Agreeing with FAO: Comments on SOFIA 2018

Pauly, D. & Zeller, D., Feb 2019, In : Marine Policy. 100, p. 332-333 2 p.

Research output: Contribution to journalLetter

Open Access
FAO
Food and Agricultural Organization
fishery
aquaculture
fisheries

A key to the species of Thomasia (Malvaceae: Byttnerioideae)

Wilkins, C. F. & Shepherd, K. A., 30 Jul 2019, In : Nuytsia. 30, p. 195-202 8 p.

Research output: Contribution to journalArticle

Open Access

A link between heritable parasite resistance and mate choice in dung beetles

Buzatto, B. A., Kotiaho, J. S., Assis, L. A. F. & Simmons, L. W., 28 Sep 2019, In : Behavioral Ecology. 30, 5, p. 1382-1387 6 p.

Research output: Contribution to journalArticle

parasite resistance
dung beetles
mate choice
mating behavior
beetle

Altered gut microbiome in Parkinson's disease and the influence of lipopolysaccharide in a human α-synuclein over-expressing mouse model

Gorecki, A. M., Preskey, L., Bakeberg, M. C., Kenna, J. E., Gildenhuys, C., MacDougall, G., Dunlop, S. A., Mastaglia, F. L., Anthony Akkari, P., Koengten, F. & Anderton, R. S., Aug 2019, In : Frontiers in Neuroscience. 13, JUL, 839.

Research output: Contribution to journalArticle

Open Access
Synucleins
Parkinson Disease
Lipopolysaccharides
Gammaproteobacteria
16S Ribosomal RNA
2 Citations (Scopus)

A monitoring toolkit for banksia woodlands: comparison of different scale methods to measure recovery of vegetation after fire

Brundrett, M., van Dongen, R., Huntley, B., Tay, N. & Longman, V., 1 Mar 2019, In : Remote Sensing in Ecology and Conservation. 5, 1, p. 33-54 22 p.

Research output: Contribution to journalArticle

Open Access
Banksia
photographs
photograph
woodlands
woodland
2 Citations (Scopus)

A multi-scale study of Australian fairy circles using soil excavations and drone-based image analysis

Getzin, S., Yizhaq, H., Muñoz-Rojas, M., Wiegand, K. & Erickson, T. E., 1 Feb 2019, In : Ecosphere. 10, 2, e02620.

Research output: Contribution to journalArticle

Open Access
drones (insects)
termite
Isoptera
image analysis
excavation

Analysing Cell Level Allocation of Calcium and Phosphorus in Leaves of Proteaceae from South-Western Australia

Hayes, P. E., Clode, P., Guilherme Pereira, C. & Lambers, H., Aug 2019, In : Microscopy and Microanalysis. 25, S2, p. 1080-1081 2 p.

Research output: Contribution to journalConference article

Analysing the dynamics and relative influence of variables affecting ecosystem responses using functional PCA and boosted regression trees: A seagrass case study

Wu, P. P. Y., Mengersen, K., Caley, M. J., McMahon, K., Rasheed, M. A. & Kendrick, G. A., 12 Aug 2019, In : Methods in Ecology and Evolution.

Research output: Contribution to journalArticle

ecosystem response
seagrass
principal component analysis
case studies
ecosystems

An assessment of fish and marine growth associated with an oil and gas platform jacket using an augmented remotely operated vehicle

McLean, D. L., Taylor, M. D., Giraldo Ospina, A. & Partridge, J. C., 15 May 2019, In : Continental Shelf Research. 179, p. 66-84 19 p.

Research output: Contribution to journalArticle

gas platform
oil platform
remotely operated vehicle
gases
oils
1 Citation (Scopus)

Anatomy and transcriptome analysis in leaves revealed how nitrogen (N) availability influence drought acclimation of Populus

Lu, M., Chen, M., Song, J., Wang, Y., Pan, Y., Wang, C., Pang, J., Fan, J. & Zhang, Y., 1 Aug 2019, In : Trees - Structure and Function. 33, 4, p. 1003-1014 12 p.

Research output: Contribution to journalArticle

Populus
Acclimatization
Droughts
Gene Expression Profiling
transcriptomics