Clover v3 assembly

  • Olga Dudchenko (Creator)
  • Melanie Pham (Creator)
  • Christopher Lui (Creator)
  • Philipp Bayer (Creator)
  • William Erskine (Creator)
  • Erez Lieberman Aiden (Creator)



We present an assembly of the genome of subterranean clover, Trifolium subterraneum, an important pasture legume. Specifically, in situ Hi-C data (48X) was used to correct misjoins and anchor, order, and orient scaffolds in a previously published genome assembly (TSUd_r1.1; scaffold N50: 287kb). This resulted in an improved genome assembly (TrSub3; scaffold N50: 56Mb) containing eight chromosome-length scaffolds that span 95% of the sequenced bases in the input assembly.
Date made available7 Dec 2017

Cite this

Dudchenko, O. (Creator), Pham, M. (Creator), Lui, C. (Creator), Bayer, P. E. (Creator), Erskine, W. (Creator), Aiden, E. L. (Creator)(7 Dec 2017). Clover v3 assembly. Zenodo. 10.5281/zenodo.1095215