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AutoSeg Evaluator

  • Branimir Rusanov (Sir Charles Gairdner Hospital) (Creator)

Dataset

Description

AutoSeg Evaluator reduces the technical and resource barriers required to conduct large-scale segmentation quality evaluations. The tool is freely offered to expedite the assessment and implementation of AI-based autocontouring systems, while also being a useful tool in the pocket of researchers that routinely investigate segmentation quality.

AutoSeg Evaluator: 
• Allows clinicians to overcome the technical expertise barrier required for converting RTSS DICOM files and evaluating segmentations by packaging all functionality within an executable graphical user interface (GUI).
• Provides users with a choice of common and advanced metrics using validated open-source implementations. Metrics include volumetric Dice Coefficient, Hausdorff Distance (95th and 100th percentile), Mean Surface Distance, Added Path Length (APL), and Surface Dice.
• Supports visualization functionality allowing users to verify outliers and perform sanity checks.
• Efficiently handles batched analyses with minimal user interaction by automatically detecting similarly named structures across patients and RTSS files using a template matching feature. Custom string replacement rules enable standardised structure renaming, improving string-matching efficiency. 
• Computational queues can be set to run in the background across multiple patients and structures while the user prepares the next batch of data.
• Outputs detailed results logs for statistical evaluation. 
Date made available18 Oct 2025
PublisherZenodo

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